Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6588 |
Symbol | |
ID | 5155977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6866835 |
End bp | 6868841 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640561284 |
Product | hypothetical protein |
Protein accession | YP_001242398 |
Protein GI | 148257813 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCA CAATCCTAGA AGCGCTTGCC GTCATCAAAG GCAAAGACGA GACCGGCGGC GCCTTCGATG CGGTTGCGCA AAAGATCGGC CGCATTGCTC GCGCGGCCAA CTCGCTCAAT CGCGACGTGC AGAAGCAAAT GAATGTCGCC GCGACGGCCG AGCGCCAGAT CGGACGGCTT GAGCGCACGT CGCGGGCGAT TGGCACCGGC GCCAAGATGG CCGCCGGCGG CCTCGCCGCC TATGAGGCAT CGCGCGCCGC TACCGCGATC GCTGAGCGCA CGGCGCGCGT CGCGGTCGAT CGTGCGCACG AGGAAACGCG CATGCGCGCG GCGGGCATGA CGGAACACGA ATTGGCCGAG GCAAACGATC TCGCCGCCGA CATCTCCAAG AAATATCCGG CGCTTTCTCA AACTAGCATG TTGCACATGG CGCGCAACGT GCGCTCGATC GTCGGCACCT ATGAGGAGGC GACAAAGGTT CTCGATCCGC TCGCCCAATT GAAGGTTGTG GCGATGGGTG CGCACCCCGA GAAGGCCGAG GAGCTTGAAG AAGATTTCGA CAAGCTTGCG AAGGGTATGG AAATCAAGGG CGTCACGCAA CACGAGGCGC AGTTCAAGCA TTACATGGAC GGCATGGCGA AGGCGATCAA CGTCTTTGGC GACACGCTTC GGCCAACTGA TTACTATGAA ATGTTCCAGT ACGGGCGCGC CGCGACCAAC GCGTTGAGCG ATGATTTCAT GCTTGCCACG GCGCCGACGA TTGCCCAAGA GTTCAAGGGC GGCGGCGCCG GCAAGGCGAT GTCGGGCTTT CATAGCCAAT TCGTCGGCGG CATCATGAAG CACTATGCCG TCAAGCAACT CGCCGATCTT GGCATGATCG ACATGAGCAA GGTCGAATTC AACAAGGTTG GCGACGTGAA GCGCGTCAAG CCGAATTTCA TGAAGGTCGG CGCCGAGTTT TTGCGGCCTG GGCATGAGGA CCCGTATCAC TGGACGCAGG CAGCGGTTGA ATATCTGCAC GGCAAGGGCA AGACCGACGA GCAAATTCAG CAACTGTTTA CCTCGATCTC GTCGCGCGAA CAGGTGGCGC AGTTGCTCAA TACGTTCTTC CTGCAAAAGG CGCGTGTTGA AAAGGATTGG GGATTGATCG GAGGCGCGAA GGGCCTCGAC GCGGCGCAAC TATTCCTGCA CAACGATCCG AAAGTCGCGC AAAAGGCCAT TGGCGCGCAA ATCGACAACT ATCTCGGCAA CACGGCGGCG CCGTTCATGC CGGCCGCAAC GGGCGGTATG AATTGGCTCG CGAGCGGCTT TAGTTATATG TCGGAGCGCG CCAAGAAAGA CCCGAAGCGC TCGGCCGCCG AGCTGGGGTT CTTCGGCGCC ATGGCCGCCG CGCTCGGCAT CGATATGTCA TCGACGGGCT TGAGCAATGC CGGGAGCCTG TTCCGGGGCG AAGGCTTGAG CGGCTTCAAG CTTGGCATGT CCAAGGCAAC CGCGATGCTA GCGCCGATCC TCGACATCGC GACGCGGCCC GACGTTCTCG ACGCTCGGGG CCGGCGCGGT TATCGGTACG ATGACGCCAA GTTCGCCCGC TTGCAGACGC TCGACGACGC CGACAATGCC GCCGGCATCT ATGGCGACAA GGATTTCGAG GCCGAGGCGC ATGCACGATA CGCCAAGGAA CGCGCGGCGA TCGAGGCCGA GTTGAGCGAA AAGGGTTACG GCCCGGCCGG CGTGCCGGGG CGAGGCATGC CGGCGTCGAG TTTCGACGTG CAGGACATCC AACGCGCGGT TGGGATCGGC GGCACGGCCG AGCCGGTTAA GGCCGTCGTC GAGGGCAACG CCACGCTCGA CGCGACGGTG ACGGTTAAGC CGAGTTCCGA GTTTTGGGCA ACCGTCGAGC AAAAGATCAG CAACGCGATC AACGCGTTTC GATCGAGCAA CACGCCGGCC TCGGGCACCT CGGGATCAAC CGGCCGGTCT ATGCCGGAAG CGGGGGCCGC GCCCTAG
|
Protein sequence | MSSTILEALA VIKGKDETGG AFDAVAQKIG RIARAANSLN RDVQKQMNVA ATAERQIGRL ERTSRAIGTG AKMAAGGLAA YEASRAATAI AERTARVAVD RAHEETRMRA AGMTEHELAE ANDLAADISK KYPALSQTSM LHMARNVRSI VGTYEEATKV LDPLAQLKVV AMGAHPEKAE ELEEDFDKLA KGMEIKGVTQ HEAQFKHYMD GMAKAINVFG DTLRPTDYYE MFQYGRAATN ALSDDFMLAT APTIAQEFKG GGAGKAMSGF HSQFVGGIMK HYAVKQLADL GMIDMSKVEF NKVGDVKRVK PNFMKVGAEF LRPGHEDPYH WTQAAVEYLH GKGKTDEQIQ QLFTSISSRE QVAQLLNTFF LQKARVEKDW GLIGGAKGLD AAQLFLHNDP KVAQKAIGAQ IDNYLGNTAA PFMPAATGGM NWLASGFSYM SERAKKDPKR SAAELGFFGA MAAALGIDMS STGLSNAGSL FRGEGLSGFK LGMSKATAML APILDIATRP DVLDARGRRG YRYDDAKFAR LQTLDDADNA AGIYGDKDFE AEAHARYAKE RAAIEAELSE KGYGPAGVPG RGMPASSFDV QDIQRAVGIG GTAEPVKAVV EGNATLDATV TVKPSSEFWA TVEQKISNAI NAFRSSNTPA SGTSGSTGRS MPEAGAAP
|
| |