Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6560 |
Symbol | |
ID | 5153882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6846326 |
End bp | 6846988 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561259 |
Product | hypothetical protein |
Protein accession | YP_001242374 |
Protein GI | 148257789 |
COG category | [S] Function unknown |
COG ID | [COG5385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.829207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCA CCTCGTCTTC AGAGATCGCA GATCCGATTC CCGCTCCCGA CACCCTCGAA CTTGCCGCGC TGCTCTGCTC GAAGGTTTGC CACGATCTGA TTAGTCCGGT CGGCGCGATC GTCAATGGGC TCGAGGTGCT GGACGACAAT CCGAAGCCTG AGGATCGCGA CTTCGCGCTC GAGCTGATCC GCAAGAGCGC CAAGACCGCC TCGGCCCGCC TGCAGTTCTG CCGGCTCGCC TTCGGGGCCG CCGGCTCGGC CGGCGCGCAG ATCGATCTCG GCGATGCGCA GACCATGGCG CGCGGCCATA TCGAGGACGC CAAGACCTCG ATCACCTGGA ACCTGCCACG GCTGCTGCTG CCCAAGAACA GGGTCAAGCT GCTGCTCAAC ATGATGGTGG TGGCGCAGCA GACGATTCCG CGCGGCGGCG TCCTCACGGT CGATCCGATC GGCGAGGGCG AGACGATGAG CTTCCGCGTC GCCGCGACCG GGCTCAATGC CCGGCTGCCG CAGAACATCG TCAACCTGCT CGCCGGTGCG CAGCAGTCGA CCATCGATGC CCACGCCGTA CAGCCTTATT ACACGCGCCT GCTCGCCGAT GCCTGCGGCC TCAAGGTGAC GCTCGCGGCC GATGGCGAAG CGATGGTCGT GCAGGCCGCT TGA
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Protein sequence | MSGTSSSEIA DPIPAPDTLE LAALLCSKVC HDLISPVGAI VNGLEVLDDN PKPEDRDFAL ELIRKSAKTA SARLQFCRLA FGAAGSAGAQ IDLGDAQTMA RGHIEDAKTS ITWNLPRLLL PKNRVKLLLN MMVVAQQTIP RGGVLTVDPI GEGETMSFRV AATGLNARLP QNIVNLLAGA QQSTIDAHAV QPYYTRLLAD ACGLKVTLAA DGEAMVVQAA
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