Gene BBta_6560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6560 
Symbol 
ID5153882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6846326 
End bp6846988 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID640561259 
Producthypothetical protein 
Protein accessionYP_001242374 
Protein GI148257789 
COG category[S] Function unknown 
COG ID[COG5385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.829207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA CCTCGTCTTC AGAGATCGCA GATCCGATTC CCGCTCCCGA CACCCTCGAA 
CTTGCCGCGC TGCTCTGCTC GAAGGTTTGC CACGATCTGA TTAGTCCGGT CGGCGCGATC
GTCAATGGGC TCGAGGTGCT GGACGACAAT CCGAAGCCTG AGGATCGCGA CTTCGCGCTC
GAGCTGATCC GCAAGAGCGC CAAGACCGCC TCGGCCCGCC TGCAGTTCTG CCGGCTCGCC
TTCGGGGCCG CCGGCTCGGC CGGCGCGCAG ATCGATCTCG GCGATGCGCA GACCATGGCG
CGCGGCCATA TCGAGGACGC CAAGACCTCG ATCACCTGGA ACCTGCCACG GCTGCTGCTG
CCCAAGAACA GGGTCAAGCT GCTGCTCAAC ATGATGGTGG TGGCGCAGCA GACGATTCCG
CGCGGCGGCG TCCTCACGGT CGATCCGATC GGCGAGGGCG AGACGATGAG CTTCCGCGTC
GCCGCGACCG GGCTCAATGC CCGGCTGCCG CAGAACATCG TCAACCTGCT CGCCGGTGCG
CAGCAGTCGA CCATCGATGC CCACGCCGTA CAGCCTTATT ACACGCGCCT GCTCGCCGAT
GCCTGCGGCC TCAAGGTGAC GCTCGCGGCC GATGGCGAAG CGATGGTCGT GCAGGCCGCT
TGA
 
Protein sequence
MSGTSSSEIA DPIPAPDTLE LAALLCSKVC HDLISPVGAI VNGLEVLDDN PKPEDRDFAL 
ELIRKSAKTA SARLQFCRLA FGAAGSAGAQ IDLGDAQTMA RGHIEDAKTS ITWNLPRLLL
PKNRVKLLLN MMVVAQQTIP RGGVLTVDPI GEGETMSFRV AATGLNARLP QNIVNLLAGA
QQSTIDAHAV QPYYTRLLAD ACGLKVTLAA DGEAMVVQAA