Gene BBta_6558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6558 
SymbolcheW 
ID5153880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6842795 
End bp6843268 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content67% 
IMG OID640561257 
ProductCheW protein 
Protein accessionYP_001242372 
Protein GI148257787 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.675554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA GCAAGATTGA AACAACCGAC GGCGCAGTCG CCGAATACGT CACCGCCGTG 
ATCGGCGGTC AGCTGTTCGG CCTGCCGATC TCGCGGGTGC AGGACGTGTT CATGCCGGAG
CGGCTGACGC GGGTGCCGCT GTCCTCGGTC GAGATCGCCG GCGTGCTGAA CCTGCGCGGC
CGCATCGTCA CCGTGATCGA CATGCGGGCG CGGCTCGGCC TTGCCAGGGC CGACGACGGC
AAGCCGCCGA TGGCGGTCGG CGTCGACCTG CGCGGCGAGT CCTACGGCCT GCTGATCGAT
CAGATCGGCG AGGTGCTGCG GCTGCCCGAG GAAAGCCGGG AGGAAAATCC CGTCAACCTC
GATCCGCGCA TGGCGAAGCT CGCCGGCGGC GTGCACCGCC TCGATGGCCA GCTGATGGTC
ATCCTCGATG TCGATCGCGT ACTCGAACTC GCTGCCGACA AGATGGCGGC CTAA
 
Protein sequence
MSSSKIETTD GAVAEYVTAV IGGQLFGLPI SRVQDVFMPE RLTRVPLSSV EIAGVLNLRG 
RIVTVIDMRA RLGLARADDG KPPMAVGVDL RGESYGLLID QIGEVLRLPE ESREENPVNL
DPRMAKLAGG VHRLDGQLMV ILDVDRVLEL AADKMAA