| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6556 |
|---|
| Symbol | cheB |
|---|
| ID | 5154627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6841104 |
|---|
| End bp | 6842285 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640561255 |
|---|
| Product | chemotaxis-specific methylesterase |
|---|
| Protein accession | YP_001242370 |
|---|
| Protein GI | 229336048 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.970962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.314489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCG CGTTGGCCAG TTCTTCGATT CCAAGTTCGA CCAGACAGGA ACCTCTCCGG
GTGATGGTCG TGGACGACTC CGTCGTCATC CGCGGCATGA TCTCGCGTTG GATCGCGTCT
GAGCCCGACA TGGTCGTGGC GGCATCGCTC CGCACCGGCC TCGAGGCCGT GAACCAGATC
GATCGGGTCA ATCCCGATGT CGCCGTGCTC GACATCGAGA TGCCTGAGCT GGATGGCATC
GCCGCTCTGC CGAAGCTGCT TGCGAAGAAG AAGAACCTGG CTGTGATCAT GGCGTCGACG
CTCACCCGTC GCAATGCCGA GATCAGCTTC AAGGCGCTGT CGCTCGGCGC TGCCGACTAT
ATTCCGAAGC CCGAGAGCAC GCGCGAGGCG TCGGCGGCGG ACAATTTCCA CCACGACCTG
ATTCAGAAGA TCCGCAACCT CGGCGCCAAA GCGCGTCGCT CTGCGCCTGC GTCCTACGCG
CCGGCGGCCG CGCCTCACGT TCAGCCCCAG GCACTCCGCC CGCTCGTTGC GCCGGTTCCG
GTGCCGGCCG CGCCGACCGC GCCGGCCCAG CTCGCGCGCC GGTCCTTCAG CACGCAGATG
CCGAAAGTGT TGCTGATCGG TTCGTCGACC GGAGGTCCGC AGGCCCTGAT GTCCGTCGTC
ACCGAGCTCG GCGCCGTCAT CGACCGCTTC CCGGTGCTGA TCACGCAGCA TATGCCGCCG
ACCTTCACCA CCATTCTCGC CGAACATCTG GCGCGTTCCA GCCGCCGGCC GGCCCACGAG
GCGATCGATG GCGAAGTCAT CAAGCCGGGC CAGATCTATC TCGCTCCGGG CGGACGCCAT
ATGCGCGTCG CCCGTCATGG GACTGACGCC GTCATCGCGC TCGACAATGG CCCGCCGGTG
AATTTCTGCA AACCCGCGGT CGATCCTCTG TTTACCTCCG CCGTGGACGT CTGGCAGGGC
GGCACGCTGG CGGTGATCCT GACCGGTATG GGTTCCGACG GCATGCGTGG CGGCAAGGAC
ATCGTCGCGG CCGGTGGCAG CGTCATTGCG CAGGACGAGG CCAGCAGTGT CGTCTGGGGC
ATGCCGGGCG CGGCTGCCAA TGCCGGCATT TGCGCTGCCA TCCTTCCCTT GAACCAGATC
GCGCCGAAGC TGGTGCGTCT GTTTGCAGGA GACCGTTCGT GA
|
|---|
| Protein sequence | MSVALASSSI PSSTRQEPLR VMVVDDSVVI RGMISRWIAS EPDMVVAASL RTGLEAVNQI
DRVNPDVAVL DIEMPELDGI AALPKLLAKK KNLAVIMAST LTRRNAEISF KALSLGAADY
IPKPESTREA SAADNFHHDL IQKIRNLGAK ARRSAPASYA PAAAPHVQPQ ALRPLVAPVP
VPAAPTAPAQ LARRSFSTQM PKVLLIGSST GGPQALMSVV TELGAVIDRF PVLITQHMPP
TFTTILAEHL ARSSRRPAHE AIDGEVIKPG QIYLAPGGRH MRVARHGTDA VIALDNGPPV
NFCKPAVDPL FTSAVDVWQG GTLAVILTGM GSDGMRGGKD IVAAGGSVIA QDEASSVVWG
MPGAAANAGI CAAILPLNQI APKLVRLFAG DRS
|
|---|
| |