| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6554 |
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| Symbol | kaiC |
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| ID | 5154625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6838307 |
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| End bp | 6840061 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640561253 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_001242368 |
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| Protein GI | 148257783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.242881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA GTGTGCGTCC TCGGATTGTG ACGCGGGATC TGCCAGTCAT TGCGAAATCG
CCGACCGGGA TCGATGGCCT CGATGAGGTC ACTTTCGGCG GCCTGCCGCA GGGACGGCCG
ACCCTTTTGT GCGGCGCCGC CGGCTGTGGC AAGACGCTGT TCGCCATGAC TTTTCTCTAC
AATGGCGCGG TTGCCTTCAA TGAGCCGGGC GTCTTCATCG CGTTCGAGGA GCAGCCCGAG
GACCTGATCA AGAATGTCGG CTCGTTGAGC TACGATATCG AGCGGCTGAT CGAGCAGAAC
AAGATCGTCG TCGACCATAT CCATCTCGAC CGCAACGAGA TCGAGGAGGC CGGCGATTAT
GATCTGGATG GCCTGTTCAT CCGCATCGGA TTTGCCATCG ATTCCATCGG CGCCAAGCGC
GTCGTGATCG ACACCATCGA GACGCTGTTC GGCGGTCTCG ACAATCAGGC CGTCTTGCGC
TCCGAGCTGC GCCGGCTGTT CGAATGGCTG AAGAGCAAGG GCGTCACCGC CATCATCACT
GGCGAGCGCG GCGACGGCAC CCTGACCCGC TACGGGCTCG AAGAATATGT CGCCGATTGT
GTGATCCTGC TCGACAACCG CGTGCACGAT CAGCTGTCCA CGCGCCGGCT GCGTGTCGTG
AAGTATCGCG GCACGGCGCA CGGCACCAAC GAATATCCGT TCATCATCGA CCAGGAAGGC
ATCACAGTGA TGCCGATCAC CTCGTCGGGA CTGGCCCATG ACGCCTGGAC CGAACGGGTG
TCGACCGGGA TCACCGATCT CGACGACATG CTCGAAGGCC AGGGCTATTA CAAGGGCTCG
AGCATTCTGG TCTCGGGCAT GGCCGGCTCG GGAAAGTCGA CCGTGTCGGC GCATTTCGCC
AACTCGATCT GCCAGGCCGG ACAGCGCTGC ATCTATTTCG CGCTGGAGGA ATCGCCGCAG
CAGATCGTGC GCAACATGCG ATCCGTCGGT CTGGATCTGC AGCAATGGGT GGATCGCGGG
CTGCTGCGGT TTTCGGCGCG GCGTCCCAAT CTCTATGGGC TGGAGACGCA TCTGGCCTCG
ATGCATCGCG AAGTGAAGGA GTTCGATCCG GCGGCTGTCG TGGTCGATCC GATCTCCGCG
CTGATGGGCG CCGGCGTTGC CGGCGACGTG CATTCGATGA CTCTGCGGCT GATCGATTTT
CTCAAATCGC GTGGCGTCAC GGCGCTGTTC ACCAATCTCG GCGCAGGCAG CGCCGAGACG
GCGACCACGG AGATGCAGAT CTCGTCGCTC ACCGATACCT GGCTGCTGCT CTATAATCGC
GAGACCAATG GCGAGCATAA TCGTCAGCTC TATCTGTTGA AATCGCGCGG CATGGCGCAT
TCCAACCAGG TTCGCGAGTT CCTGATGAGC GCCGGGGGCA TTTCGCTGCG CGAGGTCTAT
GTCGGTCCCG ATGGTGTGCT GACGGGATCG GCGCGCCTGG CGCAGGAGGC TAAAGATCGC
GCCGATCGCC TGCTGCGCAC ACAGGAGGTC GAGCGCCGCA CCCGGGAGAT CGTGCGTCGC
CGTCGTGAGA TCGCGGCGCA GATCGAAACA TTGCAGGCGC AGCTTGCGAG CGAGGAGGGG
GAGATGGAGC TTCTGAACCT GGAAGGCAGC GCCCGCGAGG ATCAACGCGC GGCCGATCGC
ATCGCCTTGG CTCAGAGCCG TGCGTCGCGA CGGGCGGCGA GCTCGTCGTC GAAGCTGATG
ACGTCAGGCA AATGA
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| Protein sequence | MKTSVRPRIV TRDLPVIAKS PTGIDGLDEV TFGGLPQGRP TLLCGAAGCG KTLFAMTFLY
NGAVAFNEPG VFIAFEEQPE DLIKNVGSLS YDIERLIEQN KIVVDHIHLD RNEIEEAGDY
DLDGLFIRIG FAIDSIGAKR VVIDTIETLF GGLDNQAVLR SELRRLFEWL KSKGVTAIIT
GERGDGTLTR YGLEEYVADC VILLDNRVHD QLSTRRLRVV KYRGTAHGTN EYPFIIDQEG
ITVMPITSSG LAHDAWTERV STGITDLDDM LEGQGYYKGS SILVSGMAGS GKSTVSAHFA
NSICQAGQRC IYFALEESPQ QIVRNMRSVG LDLQQWVDRG LLRFSARRPN LYGLETHLAS
MHREVKEFDP AAVVVDPISA LMGAGVAGDV HSMTLRLIDF LKSRGVTALF TNLGAGSAET
ATTEMQISSL TDTWLLLYNR ETNGEHNRQL YLLKSRGMAH SNQVREFLMS AGGISLREVY
VGPDGVLTGS ARLAQEAKDR ADRLLRTQEV ERRTREIVRR RREIAAQIET LQAQLASEEG
EMELLNLEGS AREDQRAADR IALAQSRASR RAASSSSKLM TSGK
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