Gene BBta_6543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6543 
Symbol 
ID5154045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6829093 
End bp6829821 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID640561242 
Producthypothetical protein 
Protein accessionYP_001242357 
Protein GI148257772 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.589979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC GCACCCTTCT CGGCATGCTG ACGCCGTCGT CGAACACGGC GCTGGAGCCC 
ATCACCTCGG CGATGGTCGC CGGCCTGCCG AACGTGTCGG CGCATTTCTC GCGCTTCAAG
GTCACCGAGA TCGCGCTGTC GAGCGATGCG CTGGCGCAGT TCGACACATC GAACATTCTG
CGCGCGGCGG AATTGCTCGC GCACGCCAAG GTCGATGTCA TCGGCTGGAA CGGCACGTCC
TCCGGCTGGC TCGGTTTCGA GACCGACGTG AAGCTGTGCG AGCAGATCAC CGCGGCGACC
GGCATCCCCG CGACCACCTC GATGCTGGCC TTGAACGAGA TCCTGGCGGC CTCGAAGGCC
ACGACGCTCG GCCTGGTCAC ACCCTACCGC GACGATGTGC AGGCCCGCAT CATCGCCAAC
TATGCCAAGC TCGGCATCGC CTGCCGCGGC GACCGGCATC TCAACCTGCA GGACAATTTC
TCCTTCGCGG AGGTGACGCC GGCGGAGATC GAGACCATGA TCCGCGAGGT CGCCCGCGAG
ACGCCGGATG CGATCGCGGT GGTCTGCACC AACATGCGGG CCGCGCCGCT CGTGGCGCGC
CTCGAGCTGG AGACGGGCAT TCCGATTCTC GACACCATCG CTACCGTGGT ATGGAAATCG
TTGAAACTGG CGGGCGTCGA CACCCGGGGC GCCAGCGAGT GGGGATCGCT GTTTCAGAAA
TTCGCCTGA
 
Protein sequence
MTKRTLLGML TPSSNTALEP ITSAMVAGLP NVSAHFSRFK VTEIALSSDA LAQFDTSNIL 
RAAELLAHAK VDVIGWNGTS SGWLGFETDV KLCEQITAAT GIPATTSMLA LNEILAASKA
TTLGLVTPYR DDVQARIIAN YAKLGIACRG DRHLNLQDNF SFAEVTPAEI ETMIREVARE
TPDAIAVVCT NMRAAPLVAR LELETGIPIL DTIATVVWKS LKLAGVDTRG ASEWGSLFQK
FA