Gene BBta_6527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6527 
SymbolflhA 
ID5150551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6808355 
End bp6810403 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content67% 
IMG OID640561226 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_001242342 
Protein GI148257757 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGCGCGGCG ACATCGCGCT GGCGCTCGGC ATCCTCACCA TCCTGGTGGT GCTGATCCTG 
CCGCTGCCGG CGATCGTGCT CGACCTGTTC CTGGCGATCT CGATCACGCT GTCGATCCTG
ATCCTGATGA CGGCCCTCTT CATCCAGGCG CCGCTGGAAT TCTCGTCCTT TCCGACCATC
CTGCTGATCT CGACGATGCT GCGGCTGTCG CTGAACCTGG CCTCGACAAG GCTGATCCTC
AGCCACGGCC ATGAGGGCAC CGACGCCGCC GGCCACGTCA TCCAGGCGTT CGGCTCGTTC
GTGATGGGCG GCAATTTCGT CATCGGCATC ATCGTGTTCG CGATCCTGGT GACGGTGAAC
TTCGTCGTCA TCACCAAGGG TTCGGGCCGT ATCGCCGAGG TCGCGGCACG CTTTCACCTG
GATTCGATGC CCGGCAAGCA GATGGCGATC GACGCCGACC TCTCCGCCGG CCTGATCGAC
GAGAAGGTCG CCAAGATGCG GCGCAAGGAG CTCGAGGACG AAAGCGGCTT CTTCGGCGCG
ATGGACGGTG CCTCGAAATT CGTCCGCGGC GACGCCGTCG CCGGCCTGCT CGTCGTGTTC
ATCAACATCA TCGGCGGCAT CATCATCGGC GTCGCCCAGC AGGGCATGTC GTTCGGCGAC
GCCGCCCGCT CCTACACGGT GCTGACGGTC GGCGACGGCC TCGTCACCCA GGTGCCGGCG
CTGATCGTGT CGACGGCCGC GGGCCTGCTG GTGTCCAAGG CCGGCGTCAG CGGCGCGGCC
GACAAGGCGC TGATGCAGCA GTTCTCCGGC TATCCGCAGG CCCTCGGCCT GTCCGCCGCC
GTCATGCTGG TGCTGGCGCT GCTGCCGGGC ATTCCGACCC TTCCGTTCCT CGCACTGGGC
GGCGGCGCCG CCGCGCTCGC CATCAAGGCG CGCAGGCAGA AGGACGTCGC CAAGGCGGTC
GAGGCCGCGG AGGCGGCGGC GCCCGCCGCA GCCGCCACCG CCGCGGCGGC CGAGGAGCCG
ATCGCGAACG CGCTGAAGAT CGACGACCTC AAGATCGAAC TTGGCTATGC GCTGCTGCCG
CTGGTCAACG GCCCCGACGG CACCGACCGG CTGACCGACC AGATCAAGGC GCTGCGGCGG
TCGCTCGCGA TCGAAATGGG CTTCGTGATG CCGTCGGTGC GCATCCTCGA CAACGTCCAG
CTCGAGGCCA ACACCTACAT CATCAAGATC AAGGAGGTCG ACGCCGGCTC CGGCAAGATC
TGGCCGAACC AGTTCATGGT CATGGACCCC GGCGGCAACC AGGTCGCGGT GCCCGGCATC
CACACCACCG AGCCGACCTT CGGACTGCCC GCCACATGGG TCGACGCCGG CCTGAAGGAA
GAAGCGACCT TGAAGGGCTA CACGGTGGTG GACGCGGCGA CCGTGCTCTC GACCCACCTG
ACCGAGCTGC TCAAGGCCAA TATGAGCGAC CTGCTGTCCT ACGGCGAGGT GCAGAAGCTT
CTGAAGGAGC TGCCGAAGGA GCAGAGCGAG CTGGTCAAGG ACATCGTGCC GACCCAGATC
ACGATCTCCG GCATCCAGCG CGTGCTGCAA TTGCTGCTGT CGGAGCGGAT CTCGATCCGC
GACCTCTCAA CCATCCTCGA AGGCATCGCC GATGCGCTGG CGTTCTCGCG CAATCCGGCC
ACCATCGTCG AGCATGTGCG CGCCCGCCTC GCCCGCCAGA TCTGCGCCCA GAACACCTCG
CCGATGGGCT ACCTGCCGCT GATCGCGCTG TCGCCGAAAT GGGAGCAGGC GTTTGCGGAA
TCGCTGATCG GCCAGGGCGA GGAGCGCAGC CTGGCGATGC AGCCGTCGAA GCTCTCCGAG
TTCATGACCG CGACGCGCGA TGCGTTCGAG CGGGCCGCGC GCGAGGGCGA GTCACCGGTG
CTGGTCACCT CGGCCGCGAT CCGGCCGTTC GTCCGCTCGC TGGTGGAACG CTTCCGGGCG
CAGACCACCG TGCTGTCGCA GGCCGAAATT CATCCTCGCG CGCGGCTCAA GACGGTCGGA
AGCGTGTGA
 
Protein sequence
MRGDIALALG ILTILVVLIL PLPAIVLDLF LAISITLSIL ILMTALFIQA PLEFSSFPTI 
LLISTMLRLS LNLASTRLIL SHGHEGTDAA GHVIQAFGSF VMGGNFVIGI IVFAILVTVN
FVVITKGSGR IAEVAARFHL DSMPGKQMAI DADLSAGLID EKVAKMRRKE LEDESGFFGA
MDGASKFVRG DAVAGLLVVF INIIGGIIIG VAQQGMSFGD AARSYTVLTV GDGLVTQVPA
LIVSTAAGLL VSKAGVSGAA DKALMQQFSG YPQALGLSAA VMLVLALLPG IPTLPFLALG
GGAAALAIKA RRQKDVAKAV EAAEAAAPAA AATAAAAEEP IANALKIDDL KIELGYALLP
LVNGPDGTDR LTDQIKALRR SLAIEMGFVM PSVRILDNVQ LEANTYIIKI KEVDAGSGKI
WPNQFMVMDP GGNQVAVPGI HTTEPTFGLP ATWVDAGLKE EATLKGYTVV DAATVLSTHL
TELLKANMSD LLSYGEVQKL LKELPKEQSE LVKDIVPTQI TISGIQRVLQ LLLSERISIR
DLSTILEGIA DALAFSRNPA TIVEHVRARL ARQICAQNTS PMGYLPLIAL SPKWEQAFAE
SLIGQGEERS LAMQPSKLSE FMTATRDAFE RAAREGESPV LVTSAAIRPF VRSLVERFRA
QTTVLSQAEI HPRARLKTVG SV