| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6522 |
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| Symbol | |
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| ID | 5156273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6800592 |
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| End bp | 6802814 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640561221 |
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| Product | SPINDLY family O-linked N-acetylglucosamine transferase |
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| Protein accession | YP_001242337 |
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| Protein GI | 148257752 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.722582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCACCG TTGGTTCGCG CGCCTTCCAG AAGGCCCGGC AGGAGAAGAA GCAGAAGAAG
CTGGTCGAGA CGCAGCTGAC GGCGGCGTAC ACGGCCTATC GCGCCGGACG GCAGGCGGAG
ACCCAGGCGA TCTGCGCGGC GCTGCTGCAG GAGGTGCCGA GCTGCTTCGA CGCTATGCAT
CTGCTCGGCG TCTCGCTCGT CACCAGCTCG CGTTTCGTCG AGGCCACCGG CTTCTTGACC
CAGGCGGTCG CGCTGGAGCC AAATTCGGCC GATGCGCAGT CCAATCTCGG CTGGGCACTG
GTCAATTGCG AGCGCTACGA GGAGGCGCGC GCCGCGCTGG AGCGATCGCT CGCGCTGCGG
CCGAACGCGC CGGTCACGTG GCGGAATCTG GCGATCGCCC TGCTGCGGCT GAAACAGGGC
GAGGCCGCCC TCGACGCCGC GACCCGCGCC CTCCAGCTCA AGCCTGACGA TGTCGATTCC
TGGTGCAACC GCAGTGTCGC CGAGCTGATG CTGCGACGCT GGGACGCCGC TGCGGCCAGC
GCCGAGCGCG CCTTGAGTTT CAACCCGGCG CATTTCGAAG CACTGGTCAA CAAGGGCCTC
GCGCATCTCG AACTGCATCA TTTCGAGCTG GCGGAAGCGA CGTTCAACAC AGCCCGCGCG
GTGCGGCCGA GCAATGCCGA GCTGCTGGCG CATCGCGGCC GGCTGTTCAT GCTGAGCGGG
CGCAATGCCG AAGCCGAAGC CGAGTTCGAC GCCGCGGTCG CGCTCGATCC CCGGCTGCAA
GTGGGCTGGC AGGGCAAGGC GCAGATCGCG ATGCTCAACG GCAACATCGC CCAGGCGATG
GCGGCCTGCA AGCGCGTGCT CGACCAGAAC CCGACGGCCC AAGTGGCGCT GACCTTGCTC
GGCGCCTGCC AGGGACGGCT CGGTGACATC GAAGGCGCGA TTGCGCGCTT CGATCAGGCG
CTCGCGGTGC AGCCGGACTA TGACGAGGCC ATCACCAAGA AGATCTTCTA TCTCGACTTC
CTCTCCGGCG CCGACTTCGC GGTCCAGCAG GCGGCGCGCT ATTATTGGTG GGTGGCGGTC
GGCTCGAAAT TCCCGCGCCG CAAGCTTGCC GCACGCGCGC TCGATCCCGA GCGGCGCATC
GTCGTCGGCT ACGTCTCGGC CGACTTCCGC ACGCACTCGG CCGCCTTCGC CTTCCTGCCG
GTGCTGCGCG GGCACGACAA GACGCAGGTG CAGGTCAATT GCTACTCGTC CTCGCCGCGC
CACGACGACT TGACGGCGAC CTTCCAGTCC ATCGCCGACG TCTGGGTCGA GGCGGCCAAC
CTCTCCGACG ACGAGCTCGC CGATCGCATC CAGGCGGACG GCGTCGACAT CCTGGTCGAT
CTCTCCGGCT ACACCACGGG CACGCGGATG CCGGTGTTCG CGCGCAAGCC GGCGCCGATC
CAGGTCACCG CTTGGGGCAG CGGCACCGGC ACGGGGCTTG CGACCATGGA CTATTTCTTC
GCCGATCCCG TCACGGTGCC CGCAAACGTC CGGCCGCTCT TCGCCGAGCG CGTGCATGAC
CTGCCGTCGG TGATCACGAT CGATCCCTTG CTCGACATTC CGCCATCGCC GCCGCCGATG
CTGCAGAACG GCCACGTCAC CTTCGGCGTC TACAATCGCA TCGACAAGAT CTCCGACGAG
GCGATTGCCT TGTGGGCGCG GCTGCTCGGC GAAGTGCCGG ACGCCAAGCT CGTCGTCAAG
CATCTCGCGC TCAACGATCC CTTGGTGCGC GACGGCCTGC TCGGCCGCTT CGTGACGCAG
GGCGTTAAGG AATCGCGCAT CCTCTGCCTC GGCGCCAGCG CGCGCAGCGA GCATCTGCGA
TCGTTCGACC GCATCGACAT CGCGCTCGAT CCGTTCCCGC AGAATGGCGG CATCTCGACG
TTCGAGGCGC TCTACATGGG CGTGCCGGTC GTTGCCAAGC TTGGTGCCGG CGCGGCCTCG
CGGGCGGCGG GCGGCATCCT GACCGCGGCC GGCCTGTCCG ATTGGGTCGC CGACGATGAC
GACGGCTACA TCCGCATCGC CAAGACATTT GCCGCGCAGC CCGAGCTGCT GGCACAGCTG
CGCACCGAGC TGCCCGGCAA GGTCGCACGC TCGCCTGCCG GCGACGTCGC CCACTACACG
CGCTGCGTCG AGGCGGGCTA TCGGCAGTTC TGGCGGGACT ATTGCGCCAA AGCCGGCACC
TGA
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| Protein sequence | MSTVGSRAFQ KARQEKKQKK LVETQLTAAY TAYRAGRQAE TQAICAALLQ EVPSCFDAMH
LLGVSLVTSS RFVEATGFLT QAVALEPNSA DAQSNLGWAL VNCERYEEAR AALERSLALR
PNAPVTWRNL AIALLRLKQG EAALDAATRA LQLKPDDVDS WCNRSVAELM LRRWDAAAAS
AERALSFNPA HFEALVNKGL AHLELHHFEL AEATFNTARA VRPSNAELLA HRGRLFMLSG
RNAEAEAEFD AAVALDPRLQ VGWQGKAQIA MLNGNIAQAM AACKRVLDQN PTAQVALTLL
GACQGRLGDI EGAIARFDQA LAVQPDYDEA ITKKIFYLDF LSGADFAVQQ AARYYWWVAV
GSKFPRRKLA ARALDPERRI VVGYVSADFR THSAAFAFLP VLRGHDKTQV QVNCYSSSPR
HDDLTATFQS IADVWVEAAN LSDDELADRI QADGVDILVD LSGYTTGTRM PVFARKPAPI
QVTAWGSGTG TGLATMDYFF ADPVTVPANV RPLFAERVHD LPSVITIDPL LDIPPSPPPM
LQNGHVTFGV YNRIDKISDE AIALWARLLG EVPDAKLVVK HLALNDPLVR DGLLGRFVTQ
GVKESRILCL GASARSEHLR SFDRIDIALD PFPQNGGIST FEALYMGVPV VAKLGAGAAS
RAAGGILTAA GLSDWVADDD DGYIRIAKTF AAQPELLAQL RTELPGKVAR SPAGDVAHYT
RCVEAGYRQF WRDYCAKAGT
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