Gene BBta_6520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6520 
Symbol 
ID5156271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6799367 
End bp6799828 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID640561219 
Productputative copper tolerance protein (cupredoxin) 
Protein accessionYP_001242335 
Protein GI148257750 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4454] Uncharacterized copper-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.264526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCC CCGTCATGAT CAGCGCCGCC ATCGCCGCCG CGATGATCGC AGCCGCGCCG 
GCGCGCGGCC ACGAGCAGCA CGGCGCGCAC GGCTATTCGG CCGGCGAGCC GGGCGACCCC
AAACTGCCGT CGCGCACCGT CGAGGTGCTC TTGACCGAGA TGGAGTTCAC CCCGGCGCGC
ATCGACGTGA AGCGCGGCGA GCAGATCCGC TTCATGCTGC GCAACAACGG CAAGGAGGAC
CATGAATTCC TGCTCGCCAC CAAGACGGAG AATCTGAAAC ACGCCGCCGT CATGAAGAAG
CATCCCCACA TGGAGCACGC CGAACCGAAC GGCGCCCGGC TCGCACCGGG CAAGACCACC
GAGCTGCTGT GGCGCTTCAC CAAGGCCGGG ACGTTCGAAT ATTCGTGCCT GATCCCCGAC
CATCGCGACT ACGGCATGAC CGGTCATGTC AGCGTCAAGT GA
 
Protein sequence
MKTPVMISAA IAAAMIAAAP ARGHEQHGAH GYSAGEPGDP KLPSRTVEVL LTEMEFTPAR 
IDVKRGEQIR FMLRNNGKED HEFLLATKTE NLKHAAVMKK HPHMEHAEPN GARLAPGKTT
ELLWRFTKAG TFEYSCLIPD HRDYGMTGHV SVK