| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6511 |
|---|
| Symbol | |
|---|
| ID | 5155858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6790082 |
|---|
| End bp | 6790921 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640561210 |
|---|
| Product | tryptophan 2,3-dioxygenase |
|---|
| Protein accession | YP_001242326 |
|---|
| Protein GI | 148257741 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
|---|
| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.153558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACG CCCCCTACGA TCCCGCCACC GAAGGCGCGC GGATGAACTT CAAGGGACGC
ATGTCCTATG GCGATTATCT GATGCTCGAT CGCCTGCTCG ACGCGCAGGC GCCGCTGTCG
TCGGCGCATG ACGAACTGCT GTTCATCATC CAGCACCAGA CCTCCGAATT GTGGATGAAG
CTCGCGATCC ACGAGATCAA GGCGGCGATG GCGGCGATCG CCAAAGACGA CGTGCAGCCG
GCGTTCAAGA TGCTGGCGCG GGTGTCGCGC ATCTTCGAGC AGCTCAACGG CGCCTGGGAC
GTGCTGCGCA CGATGACGCC AAGCGAATAT ACGCTGTTCC GCGACAAGCT CGGCGAGTCC
TCCGGATTTC AATCGTTCCA GTATCGCTCG ATCGAATTCC TGCTCGGCAA CCGCAATCTG
GCGATGCTGC GTCCGCACGC GCATCACCCC GAGTTGACCG CCGAGCTGGA AGCGATCCTC
GCCAAACCCA GCCTGTATGA TGAAGCGCTG AAGCTGCTGG CGCGGCGCGG CTTCTTCATC
GGCGCCGACG GGCAGCGCAC CGACTGGCGC GGAACGCGCA GCGAGAGCCC GGAAGTGGCG
GCGGCCTGGA CCAGCGTCTA TCGCGATCCG CAGCGGCATT GGGAGCTGTA CGAGCTGGCC
GAGAAGCTGG TCGATTTCGA GGATTATTTC CGCCGCTGGC GCTTCAACCA CGTCACCACG
GTGGAGCGCA TCATCGGCTT CAAGACCGGC ACCGGCGGTA CCAGCGGCGT GAACTATCTG
CGCAAGATGC TGGAGATCGT GTTGTTCCCC GAACTCTGGA AGCTGCGCAC CGGGCTGTGA
|
|---|
| Protein sequence | MSNAPYDPAT EGARMNFKGR MSYGDYLMLD RLLDAQAPLS SAHDELLFII QHQTSELWMK
LAIHEIKAAM AAIAKDDVQP AFKMLARVSR IFEQLNGAWD VLRTMTPSEY TLFRDKLGES
SGFQSFQYRS IEFLLGNRNL AMLRPHAHHP ELTAELEAIL AKPSLYDEAL KLLARRGFFI
GADGQRTDWR GTRSESPEVA AAWTSVYRDP QRHWELYELA EKLVDFEDYF RRWRFNHVTT
VERIIGFKTG TGGTSGVNYL RKMLEIVLFP ELWKLRTGL
|
|---|
| |