Gene BBta_6496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6496 
Symbol 
ID5155142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6771841 
End bp6772887 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content63% 
IMG OID640561195 
ProductABC transporter substrate-binding protein 
Protein accessionYP_001242311 
Protein GI148257726 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATG CTCGCCGCGC GCTCGGCTCA GCCCTCGCGC TCATGCTCGC CACCGCCGCT 
GCGCAGGCCG AGACGAAGAC GCTCTATGTC GGCATGAACG GCGGCAATTT CGAGCGCACC
TATACGCAGG CGGTGTTTCC GGATTTCGAG AAGGCCAACG ACGTCAAGAT CGTCGTTGTG
CCCGGGACTT CCTCGGAGAT CCTCGCCAAG GCGATCGCCG CGAAAGACAG GCCGCAGATG
CACCTGATGT TTCTCGATGA TGGCGTGATG ATCCGCGCGG CAGGTTTGGG CCTGTGCGAG
AAGCTGAAGC CGAGCGATGG CCTGGCGCAG CTCGAGCCGT TCGCGCGGCT GAAGAACGAC
ATCGCCGCCG GCATCGACAT CGGCATGACC GGGCTCGCCT ACAACAAGAA GCTGTTCGAC
GACAAGGGCT GGGCTGCGCC GACGTCGTGG CTCGATCTCG CCGACCCCAA GTTCAAGGAC
AAGGTCGTGT TTCAATCGGC CTCGGTGTCC ACCTTCGGAC TGCACGCCTT CCTGATGTTC
AACCGCATCA ACGGCGGCAG CGAGGCCAAT GTCGAGCCGG GCTTCAAGGC GTTCCCCGAG
ACGATCGGCA AGAACGTGCT CGAATACATC CCGAACTCGG CCAAGATCTC CGAGATGGTG
CAGACCGGCG AGGCCGCGAT CTTTCCGCTC ACGCCGACCG CGGTGTCGAC GCTGAAGGAG
AAGGGTATTC CGGTCGAATA TGCGCAGCCG AAGGAGGGCT CCGTCGTGCT GATGGTGGCC
GAATGCGTGA TCGCCAACAA TTCGGAAGCG GAGCTGGCGC AGAAGCTCGC TGCCTATCTG
CTGTCGCCGG ACGCCCAGGC GAAGGCGCTT GCCGCCGGCA ACATCGTGCC CTCCAACACG
GCAGCGAAGG CCACGACGCC CGCCGCCGAG CAGAAGCTCG CGACGTTCCA CACCTATATG
AAGACCGCGA TCACGCTGGA TTGGGACGGC ATCAACGCCA GGCGCGCCGA ATGGAATACG
CGCTGGAACA GGATGATCGA GCGCTAG
 
Protein sequence
MIDARRALGS ALALMLATAA AQAETKTLYV GMNGGNFERT YTQAVFPDFE KANDVKIVVV 
PGTSSEILAK AIAAKDRPQM HLMFLDDGVM IRAAGLGLCE KLKPSDGLAQ LEPFARLKND
IAAGIDIGMT GLAYNKKLFD DKGWAAPTSW LDLADPKFKD KVVFQSASVS TFGLHAFLMF
NRINGGSEAN VEPGFKAFPE TIGKNVLEYI PNSAKISEMV QTGEAAIFPL TPTAVSTLKE
KGIPVEYAQP KEGSVVLMVA ECVIANNSEA ELAQKLAAYL LSPDAQAKAL AAGNIVPSNT
AAKATTPAAE QKLATFHTYM KTAITLDWDG INARRAEWNT RWNRMIER