Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6488 |
Symbol | gudD |
ID | 5156243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6761778 |
End bp | 6763133 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640561187 |
Product | (D)-glucarate dehydratase 1 |
Protein accession | YP_001242303 |
Protein GI | 148257718 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACG AAGCCACCAG CACCGGGATT TCCGGCGCGC CGGTCGTCAT CGGCATGGAG GTCATTCCGG TCGCCGGGCG TGACAGCATG CTGCTCAACC TCTCAGGCGC GCATGGGCCG TTCTTCACCC GCAACCTCGT CATCCTCACT GACAATGCCG GCCACACCGG CGTCGGCGAG GTGCCGGGCG GCGAGAAGAT CCGGCAGACG CTGGAGGATG CCAAGAGCCT GATCGTCGGC CAGAGCATCG GCGCCTGCAA CACGATCCTG GCGTCGATGC GCACCGCCTT CGCCGACCGC GACGCCGGCG GCCGCGGCAA GCAGACATTC GATCTGCGCG TGATGATCCA CGCTGTCACC GCGGTCGAAT CCGCGCTGCT CGACCTCTTG GGCCAGCATC TCGGCCTGCC GGTCGCGGCG CTGCTCGGCG AAGGCCAGCA GCGGACCTCG GTCGAGGCGC TCGGCTATCT CTTCTTCATC GGCGATCGCA AGAAGACCGA CCTGCCCTAC GCGACGGGCG AAGGCGAGCG TGATGGCTGG TTCACCCTGC GCCACCATGA GGCGATGACG CCCGAGGCCG TGGTGCGGCT CGCCGAGGCC ACGCATGACG CCTACGGCTT CGCCGACTTC AAGCTGAAGG GCGGCGTGCT CAAGGGCGAG GCCGAGATCG AGGCGGTGAC GGCGATCGCC AAGCGCTTTC CGCAGGCGCG CGTCACGCTC GACCCGAACG GCGCCTGGTC GCTCGATGAG GCGATCCGGC TGTGCAAGGA CATGCACGGC ATCCTCGCTT ACGCCGAGGA CCCATGCGGC GCCGAAGCCG GCTTCTCCGG CCGCGAGATC ATGGCCGAGT TCCGCCGCGC CACCGGCCTG CCGACCGCGA CCAACATGAT CGCCACCGAC TGGCGGCAGC TCAGCCATGC GCTGCGGCTG GGTGCGGTCG ACATCCCCCT GGCCGATCCC CATTTCTGGA CCCTGCAGGG CTCGGTGCGC GTCGCCCAGA CCTGCCGCGA CAACGGCCTC ACCTGGGGTT CACACTCCAA CAACCATTTC GACATTTCGC TGGCGATGTT CACCCATGTG GCCGCCGCCG CCCCGGGCAA GGTCACCGCG ATCGACACCC ATTGGATCTG GCAGGACGGC CAGGCACTGA CGAAAGCGCC GCTGCAGATC AAGGGCGGCC GGATCGCCGT GCCCGAGCAG CCCGGGCTCG GCATCGAGGT CGACCGCGGC GCCATCGAAA AGGCTCATGC TCTGTACAAG AGCCACGGGC TCGGCGCACG CGACGACGCC GTCGCAATGC AGTATCTGAT CCCCGGCTGG ACCTTCGACG ACAAGCGCCC CTGTCTCGTG CGATGA
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Protein sequence | MSHEATSTGI SGAPVVIGME VIPVAGRDSM LLNLSGAHGP FFTRNLVILT DNAGHTGVGE VPGGEKIRQT LEDAKSLIVG QSIGACNTIL ASMRTAFADR DAGGRGKQTF DLRVMIHAVT AVESALLDLL GQHLGLPVAA LLGEGQQRTS VEALGYLFFI GDRKKTDLPY ATGEGERDGW FTLRHHEAMT PEAVVRLAEA THDAYGFADF KLKGGVLKGE AEIEAVTAIA KRFPQARVTL DPNGAWSLDE AIRLCKDMHG ILAYAEDPCG AEAGFSGREI MAEFRRATGL PTATNMIATD WRQLSHALRL GAVDIPLADP HFWTLQGSVR VAQTCRDNGL TWGSHSNNHF DISLAMFTHV AAAAPGKVTA IDTHWIWQDG QALTKAPLQI KGGRIAVPEQ PGLGIEVDRG AIEKAHALYK SHGLGARDDA VAMQYLIPGW TFDDKRPCLV R
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