Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6485 |
Symbol | |
ID | 5155876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6758068 |
End bp | 6759405 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640561184 |
Product | major facilitator superfamily D-glucarate permease |
Protein accession | YP_001242300 |
Protein GI | 148257715 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.848435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAA TCGTATCCAC GGCCGAATTG CGCCGATCGC GCGTGCGGCT GCTCATCGTG ACCATGCTGT TCCTGGTCAC GACCGTGAAC TATGCCGACC GCGCCACGCT GTCGATCGCT GGACCGGCGC TGTCCAAGGA GCTGCATCTC GATCCTGTCG CGATGGGCTA TGTATTCTCC GCCTTCGGCT GGTCCTATGT GCTTGCCCAG GTGCCGGGCG GCTGGCTGCT CGACCGCTTC GGCTCGCGCT GGGTCTATGC CTGCAGCATC GTCGTCTGGT CGATCTTCAC ACTGATGCAG GGCTGGATCG GCTTCTTCTC CGGCGGCGCG GCCATCGTCG CGCTGTTCGC CCTTCGCTTC CTGGTCGGAC TCGCCGAGGC GCCGAGCTTC CCGGCCAACG CGCGCATCGT GGCCGCCTGG TTTCCGAGCA ACGAGCGCGG CACGGCATCG GCGTTCTTCA ACTCCGGGCA GTATTTCGCC ACTGTGATCT TCGCGCCGCT GATGGGCTGG ATCGCGCATG AATTCGGCTG GCGCCACGTC TTCACCGTGA TGGGCGCGCT CGGCATCCTC ATGGGCCTGG TCTGGATCAA GACCATGTAC GGCCCCAAGG AGCATCCCGG CGTCAACGAG GCGGAGCTCG ATTATATCAA GGAAGGCGGC GCGCTGGTCG ACATGGAGGG CGCGCAAGAC GGCAAGACCG CATCGGGCGG ACCGACCTGG TCGCATATCG GACAGTTGCT CTCCAACCGC ATGATGCTCG GCGTCTATAT CGGCCAGTAT TGCATCAACA CGCTGACCTA TTTCTTCCTC ACCTGGTTTC CGGTCTATCT GGTCAAGGAG CGCGGGCTGT CGATCCTGCA GGCGGGCTTC GTCGCCACGT TGCCGGCGCT GTGCGGCTTC ATCGGCGGCG TGCTCGGCGG CTTCATCTCC GACGCCATCC TGCGCAAGAC CGGCTCGCTG ACGCTGGCGC GCAAGATCCC GATCGTCGGC GGCATGCTGC TGTCCATGGC TATCATCGGC TGCAATTATG TCGACGGCCA GGCGCTGGTG GTCGGGCTGA TGGCGCTCGC CTTCTTCGGC AAGGGCATCG GTGCGCTCGG CTGGGCGGTC GTCTCCGACA CCTCGCCGAA GGAAGCCGGC GGCGTCTCCG GCGGCCTGTT CAACACCTTC GGCAACCTCT CCAGCATCAC CACGCCGATC GTGATCGGCT ACATCCTGTC GGCCACCAAC TCCTTCAACG GCGCGCTGGT GTTCGTCGGC CTCAATGCCC TGGTGGCGGC GTTTGCCTAT CTCGTCATCG TTGGCCGCAT CCAGCGCGTC CAACTCCGAG CCTCCTGA
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Protein sequence | MSAIVSTAEL RRSRVRLLIV TMLFLVTTVN YADRATLSIA GPALSKELHL DPVAMGYVFS AFGWSYVLAQ VPGGWLLDRF GSRWVYACSI VVWSIFTLMQ GWIGFFSGGA AIVALFALRF LVGLAEAPSF PANARIVAAW FPSNERGTAS AFFNSGQYFA TVIFAPLMGW IAHEFGWRHV FTVMGALGIL MGLVWIKTMY GPKEHPGVNE AELDYIKEGG ALVDMEGAQD GKTASGGPTW SHIGQLLSNR MMLGVYIGQY CINTLTYFFL TWFPVYLVKE RGLSILQAGF VATLPALCGF IGGVLGGFIS DAILRKTGSL TLARKIPIVG GMLLSMAIIG CNYVDGQALV VGLMALAFFG KGIGALGWAV VSDTSPKEAG GVSGGLFNTF GNLSSITTPI VIGYILSATN SFNGALVFVG LNALVAAFAY LVIVGRIQRV QLRAS
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