| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6477 |
|---|
| Symbol | |
|---|
| ID | 5149430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6747556 |
|---|
| End bp | 6748908 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640561176 |
|---|
| Product | putative beta-glucosidase |
|---|
| Protein accession | YP_001242292 |
|---|
| Protein GI | 148257707 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
|---|
| TIGRFAM ID | [TIGR03356] beta-galactosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.87446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC GTCCACGCTT CGTCTGGGGC GCATCCACCT CGGCCTTCCA GATCGAAGGC
GCGGCGCATC GCGACGGTCG GGCCGACAGC ATCTGGGATG TCTATCTGCG GGCGCCCGGC
CGCGTCAGCC ACAATGATAC CGCTGACATC GCGTGCGACC ACTATCATCG CTATGCCGAC
GATGTGACGC TGATGCGCGA TCTCGGCCTC GATGCCTATC GCTTCTCGAT CGCCTGGCCG
CGGGTGCTGC CGCAGGGACG CGGCGCGGCC AACGAAGCCG GACTTGCCTT CTACGACCGC
CTGATCGATG CCCTGCTGGC CGCAGGAATC GAGCCCTGGC TCTGCCTCTA TCATTGGGAC
CTGCCGCAGG CCCTGGGCGA GCTCGGCGGC TGGCAGAACC GCGATATCGC CGGCTGGTTC
GCCGACTACA CCGCACTGGT GGCGCGGCGC TATGGTGACC GGGTCAAGCG CTTCGCGACC
TTCAACGAGC CTGGCGTGTT CACGCTGTTC GGCTACGGGC TGGGCTGGCA TGCGCCGGGC
GTCGCAGACA AGGCAGCGCT GCACCAGGCC ATTCATCACG TCAATCTCAG CCATGGCCGC
GCCGTCGACG TGCTGCGCCG CGACGTCGTC GGCGCCTCGA TCGGCGCCAT CCATAATCGC
CAGCCCTGCT ATCCCTGCAC CAGCAGTCCC GAGGACGCGG CTGCCGCGCT GCGGCTCGCG
GCCTATTGGA ACGACGCCTT CCCGTTTCCG CAGGCGTTCG CCTGCTATCC GCCGGCACTG
CGCGACGCCG TCACGCCCTA TGTCAGGCCC GACGACATGG CGCAGATCGG CCGCCCCGTC
GACTGGTTCG GGCTGAATCA CTATTCGCCG CATTACGTCA AGGCCGACAC CAACCTGATC
GGCGCCAGTT TCGGTCCGCC GCCGCAGGCC GTGCCGCGCA GTGCGATCGG CTGGCCCGTG
GTGCCGGATG CGTTCCGCGA AACGCTGGTC GATATCGACC AGCGGTTCCG GATCCCGATC
TATGTGATGG AGAACGGCAC GGCCGCCGCC GACGTGATCG ATCCCGCGGG CGATATCCAG
GATGACGACC GGATCGGCTA TCTCAAGGCC TATATCACGG CCATGGAACA GGCCATCGCC
GCGGGCGCGG ATGTGCGCGG CTATTTCGTC TGGTCGCTGA TGGATAATTT TGAATGGGGG
GCGGGCTATT CGCAGCGTTT CGGCATTGTC TATGTCGACC ACGCCACGCA GCGCCGCATT
CCCAAGGCAT CGGCGCGATG GTATGCGGAG ATGATTGCGG CAAGGCGGTC GCCCGACGAT
CCGGCCGGGC CGCACAACCG GGCGGAAGAG TGA
|
|---|
| Protein sequence | MTTRPRFVWG ASTSAFQIEG AAHRDGRADS IWDVYLRAPG RVSHNDTADI ACDHYHRYAD
DVTLMRDLGL DAYRFSIAWP RVLPQGRGAA NEAGLAFYDR LIDALLAAGI EPWLCLYHWD
LPQALGELGG WQNRDIAGWF ADYTALVARR YGDRVKRFAT FNEPGVFTLF GYGLGWHAPG
VADKAALHQA IHHVNLSHGR AVDVLRRDVV GASIGAIHNR QPCYPCTSSP EDAAAALRLA
AYWNDAFPFP QAFACYPPAL RDAVTPYVRP DDMAQIGRPV DWFGLNHYSP HYVKADTNLI
GASFGPPPQA VPRSAIGWPV VPDAFRETLV DIDQRFRIPI YVMENGTAAA DVIDPAGDIQ
DDDRIGYLKA YITAMEQAIA AGADVRGYFV WSLMDNFEWG AGYSQRFGIV YVDHATQRRI
PKASARWYAE MIAARRSPDD PAGPHNRAEE
|
|---|
| |