| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6472 |
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| Symbol | |
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| ID | 5155740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6741939 |
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| End bp | 6743426 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640561171 |
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| Product | putative oligopeptide ABC transporter (substrate-binding protein) |
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| Protein accession | YP_001242287 |
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| Protein GI | 148257702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.149439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA GATTATCGAT CGTCGCACTG GCCGCGCTCG TCGCGGCCAT CGGGCCGGCC
TCGGCGCAGA GCAAAAAAGA CAGCGTCGTC GTCGGCATGA CCTTGGAGCC GCCGGGCCTC
GACCCGACCA GCGCGGCCGC CGCGGCCATC GCCGAGGTCA CGCTCTACAA TGTCTATGAG
ACGCTGACCA AGATCAACGA GGACGGCTCG GTGTCGCCGC TGCTGGCGCA GAGCTGGCAG
GCCTCGTCCG ATCTGAAGAG CTACACCTTC AAGCTGGCCA AGGGCGTTAA ATTCCAGAAC
GGCGAGGCGT TCGATTCCTC GACGGTGAAG TTCGCGTTCG AGCGCGCTGG CGCCGCCAAC
AGCACCAACA AAGACAAGGC GCTGTTCCAA GCGATGGAAC AGGTGACAGC TCCCGATGCC
GAGACGATCG AGATCAAGCT GAAATATTCC GAGCCGAACC TGCCGTTCCT GCTCGGACAG
GCGACCGCAT CAATCGTCGA GCCGAAGAGC GCGCCGACCA ATGCGACGCA GCCGGTTGGC
ACCGGGCCGT ATACGCTCGG CGCCTGGGCC AAGGGCTCGT CGCTGACCTT GAACAAATGG
CCCGATTATC GCAACGCGGC CGCGGTCAAG CTGTCCAAGG TGACGATCCG CTTCATCTCC
GACCCGGCGG CGCAGGTCGC GGCGCTGCTG TCGGGCGATG TCGACGCCTT CCCGCGCGGC
ACCTCGGCGC GCACCTTGCC GCAGTTCAAA TCCGACCCGC GCTTTACGGT GCTGATCGGT
GGCTCCAAGG CGAAGACCAT CGTCACCATC AACAACAAGA AGAAGCCGCT CGACGACGTT
CGCGTCCGCC GCGCCATCCT GGCCGCGATC GACCGCAAGG CGATGATCGA GGGCGCCGTC
GATGGGCTGG GCACGCCGAT CGGCAGCTTC TACGTGCCGG GCTCGCTCGG CTATGTCGAT
ACCACCGACA TCAATCCCTA CGATCCGGAG AAGGCCAAGA AGCTGCTTGC CGAGGCCGGC
GTAACTACGC CGCTGCAGCT CTCTCTACGG CTGCCGCCGC CGGCCTATGC GCGGCAGGGC
GGCGAGGTGC TCGCGGCGCA ATTGGCCAAG GTCGGCATCA TCGCCAAGAT CGAGAATCTC
GAATGGGCGG CGTGGCTGTC TCAGGTCTTC AACGGCCCGC ACGATTTCGA CCTGACGATC
GTCTCGCATG TCGAGCCGTT CGATCTCGTG AAGTTCACCG AGAAGAACTA CTATTTCGGC
TATCAGTCCG AGGCGTTCGA CAGGCTGTAT CAGCAGATCG TCGATACGCC GAACGAGACG
GAGCGCGCCA AGCTGCTCGG CGACGCCCAG CGCATGCTGG CGACCGACGC TGCCGCCGGT
TTCCTGTTCC AGCCGCAATG GATCACGATC ATCAACAAGA AGCTGAAGGG CGTCTGGAAG
GACGTGCCGC AGTTCGAGAA TGATTTCTCG AGCTGGTCCT GGGAGTGA
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| Protein sequence | MFKRLSIVAL AALVAAIGPA SAQSKKDSVV VGMTLEPPGL DPTSAAAAAI AEVTLYNVYE
TLTKINEDGS VSPLLAQSWQ ASSDLKSYTF KLAKGVKFQN GEAFDSSTVK FAFERAGAAN
STNKDKALFQ AMEQVTAPDA ETIEIKLKYS EPNLPFLLGQ ATASIVEPKS APTNATQPVG
TGPYTLGAWA KGSSLTLNKW PDYRNAAAVK LSKVTIRFIS DPAAQVAALL SGDVDAFPRG
TSARTLPQFK SDPRFTVLIG GSKAKTIVTI NNKKKPLDDV RVRRAILAAI DRKAMIEGAV
DGLGTPIGSF YVPGSLGYVD TTDINPYDPE KAKKLLAEAG VTTPLQLSLR LPPPAYARQG
GEVLAAQLAK VGIIAKIENL EWAAWLSQVF NGPHDFDLTI VSHVEPFDLV KFTEKNYYFG
YQSEAFDRLY QQIVDTPNET ERAKLLGDAQ RMLATDAAAG FLFQPQWITI INKKLKGVWK
DVPQFENDFS SWSWE
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