| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6468 |
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| Symbol | |
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| ID | 5156312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6739911 |
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| End bp | 6740768 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561168 |
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| Product | putative oligopeptide ABC transporter (permease protein) |
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| Protein accession | YP_001242284 |
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| Protein GI | 148257699 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.787474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG TTGCGATGAA GGCCCCCACC GCAAGGCGGC TGCGCTGGCC CAATATTCCC
GTCTCGGTCA TCATGGCCAT CGGCTGGATC GCAGCGATGC TCATCGTGGC CATCTTCGCC
GATCAGATCG CGCCCTATGG CTTCACCAAG TTCGATCTGC GCAACCGTCT TGCTTTGCCG
GGCAACCCGG CGCATTGGCT CGGCACCGAC GAGCTCGGCC GCGACGTGCT GTCGCGCCTG
ATCGTCTCGA TCCGGATCTC ATTGCTGATC GCGTTCGGCG CGACCGCGAT CTCGGCCATC
GTCGGCACCA CGCTCGGCTT CCTGGCCGCG CATTTCCGCG GCCTGGTCGA GCAATTCGTG
CTGATGCTCG CCGACTTCCA GGCCAGCATG CCGTTCCTGA TCCTGGCGCT CGCGGTGCTC
GCCTTCTTCG GCAATTCGCT GCCGCTGTTG ATCGGGCTGA TGGGCCTGTT CGGCTGGGAG
CGTTACGCGC GCATCGCGCG CGGGCTGGCG ATCTCAGCCA ATGCGCAGGG CTACGCCGCC
GCCGTGCGTC AGCTCGGCGC GACGCCGCAG CGCGTCTATC TCAGGCACAT CCTGCCGAAC
ATCGCCTCGA CACTGATCGT CTCGATGACC TTGGTGTTCC CGGAGGTCAT CCTGCTGGAA
TCCGGCCTGT CCTTCCTTGG CCTCGGCGTG CAGCCGCCGA TGACCAGCCT CGGCAACATG
GTCGGCTATG GCCGCGAATA CCTTACGCGC GCGCCATGGG TCATGCTGGC CCCGGCAGTC
ACGATCGTCA TCACCACGCT CGCGGTCTCG ATGATCGGCG ACTGGCTGCG CGACCGGCTC
GACCCGACCT TGCAATGA
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| Protein sequence | MTDVAMKAPT ARRLRWPNIP VSVIMAIGWI AAMLIVAIFA DQIAPYGFTK FDLRNRLALP
GNPAHWLGTD ELGRDVLSRL IVSIRISLLI AFGATAISAI VGTTLGFLAA HFRGLVEQFV
LMLADFQASM PFLILALAVL AFFGNSLPLL IGLMGLFGWE RYARIARGLA ISANAQGYAA
AVRQLGATPQ RVYLRHILPN IASTLIVSMT LVFPEVILLE SGLSFLGLGV QPPMTSLGNM
VGYGREYLTR APWVMLAPAV TIVITTLAVS MIGDWLRDRL DPTLQ
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