| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6467 |
|---|
| Symbol | |
|---|
| ID | 5156311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6738985 |
|---|
| End bp | 6739914 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640561167 |
|---|
| Product | putative oligopeptide ABC transporter (permease protein) |
|---|
| Protein accession | YP_001242283 |
|---|
| Protein GI | 148257698 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGCT TCTTCGCGAT CCGCTTTGCG CGCGCGCTGC TGACGATCGC GCTGGTCGTC
ACCTTCGCCT TCATCGTGCT CAGGCTCTCC GGCGATCCCG CGCTGATGAT CATGGGACCT
GAAGCGCCGC CCGAGGTGAT CGAGGCGTTC CGCAAGGCCT GGGGCCTCGA TCATCCGATC
TGGGTGCAGT ATCTCGACTA CTTCAAGGCG ATCGGCCAGG GTGAGCTCGG GCGCTCGATG
CGCGACGGCC GACCGGCGAT CCAATTGGTC ATCGAGCGCA TTCCTGCGAC GCTCGCGCTG
ACCATTCCGG CCTTCCTGGT GAAGGTGCTG CTCGGCATTC CCGCGGGAAT CTATGCCGCG
CTGCATCGGG GATCTGCCAT CGACCGCGCG GTGATGATCA CGGCCGTGGC CGGCTTCACG
GTGCCGAGCT TTGTGCTGGC GCTGCTGCTG GTCTTGATCT TCGCCGTGCA ACTCGGCTGG
CTGCCGTCGG GCGGACAGGA CTCGTGGCGT CACGCCATCC TGCCGATCGC CACACTCGGC
TTCGGCGGCG CCGCCGTGCT GGCGCGGTTC ACGCGCAGCG CCATGCTGGA GATCCTCGGC
CAGCCCTATA TTCGCACGGC ATCGGCCAAG GGCGTGCCCT GGCGGCGCGT GATCACGGAC
CATGCGCTGC CGAATGCCGC GATTCCCACC GTGACCATTC TCGGCTTCAT GGTCGGCAGC
CTGATCGCCG GTGCCGTCGT GGTCGAAAGC GTGTTCTCGT GGCCCGGCGT GGGCCGGCTG
TTGGTCGTCG CGGTCGCCAA TCGCGACCTC GCGGTCGTGC AATGCATCCT GCTGCTGGTG
GCGATGACGA TGGTCACCTC GAACCTGATC GTCGATTTCC TGTACGGCCT GCTCGATCCA
CGGCTGCGCA GCAAGGGAGC TGCGGCATGA
|
|---|
| Protein sequence | MLRFFAIRFA RALLTIALVV TFAFIVLRLS GDPALMIMGP EAPPEVIEAF RKAWGLDHPI
WVQYLDYFKA IGQGELGRSM RDGRPAIQLV IERIPATLAL TIPAFLVKVL LGIPAGIYAA
LHRGSAIDRA VMITAVAGFT VPSFVLALLL VLIFAVQLGW LPSGGQDSWR HAILPIATLG
FGGAAVLARF TRSAMLEILG QPYIRTASAK GVPWRRVITD HALPNAAIPT VTILGFMVGS
LIAGAVVVES VFSWPGVGRL LVVAVANRDL AVVQCILLLV AMTMVTSNLI VDFLYGLLDP
RLRSKGAAA
|
|---|
| |