| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6464 |
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| Symbol | |
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| ID | 5152411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6735380 |
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| End bp | 6737017 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561164 |
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| Product | putative oligopeptide ABC transporter (substrate-binding protein) |
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| Protein accession | YP_001242280 |
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| Protein GI | 148257695 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.69774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC TCACCCGCCG TGGCCTGCTC GGCGCCGGCG CCGCGATCGG CGGCAGCTTC
ATCCTGCCGC GCGTGTCGAT CGCACAAGCC GACAATCGCC CCTCGGTCAC CATCGCCGTG
CAGAAGGTGA CGAACTCCAA CGTGCTCGAC GTGCTGCGCG AGCAGTCCAA TGTCGGCGAG
CGGGTGTTCT ACTCGTCGCT GTGGGAGAGC CTGATCTCGA AGAACTTCCG CGGCAATCTC
GAAGCCGTCC CCGGCCTTGC CACCGAGTGG AAGCGCATCG ACGACCAGAC CGTCGAGCTG
AAGCTGCGCC AGGGCGTCAA GTTCCACAAC GGCGACGAGA TGACGTCCGA GGACGTCGTA
TTCTCGTTCA GCCGCGAGCG CATGTTCGGC GACAGCGAGG CCAAGAGCCG CACCACCATC
AAGGCGTTCG AGAAGATCCC GACGCCACGC CCCGGCAAGG AGCTGCCGCC GGACGTGATC
GGCGTCGCCC GCCGGATGTG GCCGGATCTC GTTCGCGTCG ACGCGGTGGA CAAATATACC
GTCCGCTTCG TCAACGCGAC GCCGGACGTG ACCATCGAAG GCCGCCTGAT GCGCTACGGC
TCCGACATCA TGAGCCGGCG CGGCTGGGAG GAAGCGGCGA GCTATCTCGA TTGGGCGCGC
AAGCCGATCA CGACAGGCCC CTACAAGATC GTCGAATTCA AGCCGGACGT GTCGCTGACG
CTGGAAGCTC ATGACGAATA TTGGGGCGGT CGCCCGCCGC TGAAGCGCAT CCGCTTCGTC
GAGGTGCCGG AGGTCGCAAG CCGCATCAAC GGGCTGCTGT CGGGCGAATA TCAGTTCGCC
TGCGATATCC CGCCGGACCA GATCGCCGGC ATCGAGAAGA ACGCGGCGTT CGAGGTGCAG
GGCGGCACCA TCCTCAATCA CCGCCTGACC GTGTTCGACA AGAACCATCC GCAGCTCGCC
AATCCGCTGG TGCGCCGCGC CTTCACCCAT GCGATCGACC GCCAGGCGAT CGTCGACAGC
CTGTGGGCCG GCCGCACCCG CGTGCCGAAG GGCCTGCAAT GGGAGTTCTA CGGCGACATG
TTCATCGCCG ATTGGAGCGT GCCGGCGTTT GATCCGAAGC TGGCGCAGGA CCTGCTCAAG
CAGGCCGGCT ACAAGGGCGA TCCGATCCCC TACCGCCTGC TCAACAACTA CTACACCAAC
CAGGTCGCGA CCGCGCAGGT GCTGGTCGAG ATGTGGCAGG CGGTCGGCTT GAACGTGCAG
ATCGAGACCA AGGAGAACTG GTCGCAGATC CTCGAGCGCG CCCCCACCCG CGCGGTGCGC
GACTGGTCGA ATTCGGCGGC GTTCAACGAT CCAGTCTCCT CGCTCGTGGC CCAGCACGGT
CCGAACGGCC AGCAGCAGCA GGTCGGCGAG TGGAGCAATG CGGAGCTGAA CAAGCTGTCG
GAGTTCCTGG AGACCTCGAC CGACCGCGAG GCGCGCAAGA AGGCGTTCCG CCGCATGCTG
GAGATCGCCG AGCGCGAGGA CCCAGCCTAC ACGGTGCTGC ACCAGAACGC GACCTTCACC
GCCAAGCCGA AGTCGATCAA GTGGAAGGCC TCGCCGGCCT TCGCGATGGA CTTCCGCACC
GGCAACTACG GAGTCTGA
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| Protein sequence | MTKLTRRGLL GAGAAIGGSF ILPRVSIAQA DNRPSVTIAV QKVTNSNVLD VLREQSNVGE
RVFYSSLWES LISKNFRGNL EAVPGLATEW KRIDDQTVEL KLRQGVKFHN GDEMTSEDVV
FSFSRERMFG DSEAKSRTTI KAFEKIPTPR PGKELPPDVI GVARRMWPDL VRVDAVDKYT
VRFVNATPDV TIEGRLMRYG SDIMSRRGWE EAASYLDWAR KPITTGPYKI VEFKPDVSLT
LEAHDEYWGG RPPLKRIRFV EVPEVASRIN GLLSGEYQFA CDIPPDQIAG IEKNAAFEVQ
GGTILNHRLT VFDKNHPQLA NPLVRRAFTH AIDRQAIVDS LWAGRTRVPK GLQWEFYGDM
FIADWSVPAF DPKLAQDLLK QAGYKGDPIP YRLLNNYYTN QVATAQVLVE MWQAVGLNVQ
IETKENWSQI LERAPTRAVR DWSNSAAFND PVSSLVAQHG PNGQQQQVGE WSNAELNKLS
EFLETSTDRE ARKKAFRRML EIAEREDPAY TVLHQNATFT AKPKSIKWKA SPAFAMDFRT
GNYGV
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