| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6448 |
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| Symbol | bchD |
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| ID | 5154755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6717473 |
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| End bp | 6719215 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640561148 |
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| Product | magnesium chelatase subunit D |
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| Protein accession | YP_001242264 |
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| Protein GI | 148257679 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACG GCGCCGCGAT CTGGGCCGAT GCGATGATCG CAGCCGCGCT GGCTGCGATC
GATCCGGCGG CGGCGTCAGT GATGTTGCGT GCAGGCGCGG GGCCGGTGCG CGAGCAGTGG
CTCGAACTGC TACGCGAGCT GACGCCGGCG ACGACGGTTC TTCGCAAGCT CCCGCCGTCC
ATCTCCGATG ATCGCCTGCT CGGCGGGCTC GATCTCGCCG CCACCTTGCA GGCCGGCCGT
CCGGTGATGC AGCGCGGGCT GCTCGCCGAG CTTCATGACG GCATGCTGAT CGCCGTCATG
GCCGAGCGGA TCGCGCCGTC GACCGTCGCC CATCTCACGG CCGCGCTCGA TACCGGCATG
ATCAGCATCG AGCGCGATGG CCTGTCGCTG CGCGCGCCGG CGCGGTTCGG CCTGATCGCG
CTCGACGAGG GGATTGGCGA TGAGCACGTG TCGCCGGCAC TCGCCGACCG CCTGGCCTGT
CATCTCGATC TTGGGATGGT CGCCCGCGCC GATCTCGGCG AGAGCCTGTT CACATCCTCG
GACATCGCGG CTGCGCGGGC GCTGCTGCCG CAGGTCGGTC TGTCCGACGA AGCCATCGCG
GCGCTGACGA CGACGGCGTG CGCGCTCGGC ATCGACTCGC TGCGCGCGCC GCTGCTGGCG
TGTCGGATTG CGCGCATCGC AGCGGCGCTG GATGGCGCGA CCGATGTCGC GGAATCTCAC
ATCGCGTGCG CCGCGCGGCT GGTGCTGGCG CCGCGTGCGA CGCGGCTGCC TGCAGCGGAT
GACGAGACCG AGACCAACGA GGCGCCGGAG CCTGAGAACG ACCCGGCCGA GAACGAGGAG
GACGACCGCA GCGAGGACGG TCCGCTCGAG GATCGCGTGC TCGAGGCAGC GCAGGCGGCC
ATTCCGGCTG ATCTGCTCAA GCGCCTGCAG GAGGAGCGCG CGACCCGCCT CCGCAGCAGT
AGCGCCAGCA AGCAGGGCAC CACGCAAAAG GCGCCGAAGC GCGGCCGTCC CATTGGCGCA
CGCCGCGGCG AGTGGCGGGC GGGCGCGCGG CTCAACGTGC TCGAAACTTT GCGCGCGGCG
GCGCCTTGGC AGCCGCTGCG GCGGGCGCAG CGCTCCGGCA AGAGCGGCCG GCTGATCGTG
CACAAGGACG ACATCCGCCT CACGCGCTTC AAGCAGCGCT CGGGCACCAC GACGATCTTC
GTCGTCGACG CCTCCGGCTC CTCGGCGCTG CAGCGGCTTG CCGAAGTGAA GGGCGCTGTC
GAGCTGCTGC TCGCCGAATG CTACATCCGC CGCGACGAGG TCGCGCTGAT CGCATTTCGC
GGCAAGGGCG CCGAGCTGCT GCTGCCGCCG ACCCGCTCGC TGACCCGCGC CAAGCGCAGC
TTGGCAGCGC TTCCCGGCGG CGGCGGCACG CCGCTGTCGG CGGCGATCTT TGCTGCCACC
GAGCTCGCGC TTGCCGTGAA GGCCAAGGGA CAGGCGCCGA CCATCGTGCT GATGACCGAC
GGCCGCGCCA ATGTCGCCCG CGATGGTGTC GGCGGACGCA GCGAGGCGGA GGCGGAGGCG
CTGGTGGCCG CCAGGCAGCT CGCGCTCACC GGCATCCCCG TGGTGCTGGT CGATTCCTCG
CCCCGCCCGC AGGACAAGGC GGCGCAATTG GCCGGCGCGA TGCAGGCCCG CTACGTCGCG
CTGCCTCATG CCGACGCGGC GCGGTTGTCG CAGGCGGTGA TGGCCGAGGC CAGCCGCGGC
TGA
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| Protein sequence | MSDGAAIWAD AMIAAALAAI DPAAASVMLR AGAGPVREQW LELLRELTPA TTVLRKLPPS
ISDDRLLGGL DLAATLQAGR PVMQRGLLAE LHDGMLIAVM AERIAPSTVA HLTAALDTGM
ISIERDGLSL RAPARFGLIA LDEGIGDEHV SPALADRLAC HLDLGMVARA DLGESLFTSS
DIAAARALLP QVGLSDEAIA ALTTTACALG IDSLRAPLLA CRIARIAAAL DGATDVAESH
IACAARLVLA PRATRLPAAD DETETNEAPE PENDPAENEE DDRSEDGPLE DRVLEAAQAA
IPADLLKRLQ EERATRLRSS SASKQGTTQK APKRGRPIGA RRGEWRAGAR LNVLETLRAA
APWQPLRRAQ RSGKSGRLIV HKDDIRLTRF KQRSGTTTIF VVDASGSSAL QRLAEVKGAV
ELLLAECYIR RDEVALIAFR GKGAELLLPP TRSLTRAKRS LAALPGGGGT PLSAAIFAAT
ELALAVKAKG QAPTIVLMTD GRANVARDGV GGRSEAEAEA LVAARQLALT GIPVVLVDSS
PRPQDKAAQL AGAMQARYVA LPHADAARLS QAVMAEASRG
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