| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6428 |
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| Symbol | brbphP |
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| ID | 5155473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6696865 |
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| End bp | 6699036 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640561128 |
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| Product | bacteriophytochrome |
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| Protein accession | YP_001242244 |
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| Protein GI | 148257659 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.688062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGTTC CGCTGACGAC GCCAGCCTTC GGCCACGCTA CTCTTGCGAA TTGCGAGCGC
GAACAGATTC ATCTCGCAGG CTCGATCCAG CCGCATGGCA TCCTGCTGGC GGTCAAGGAG
CCCGACAATC TCGTCATCCA GGCCAGCACC AATGCGGCGG CCTTCCTCAA CACCAATTCG
GTTGTCGGAC GTCCGCTGCG CGATCTCGGC GGCGACTTGG CGCTGCAGAT CCTGCCGCAT
CTGAACGGCC CGCTGCATCT GGCGCCGATG ACCCTACGCT GCGCGGTGGG GACGCCGCCG
CGGCGCGTCG ACTGTACAAT TCACCGCCCA TCAAATGGCG GGCTGATCAT CGAGCTGGAA
CCGGCGACGA AAACGACCAA CATCGCGCCT GCGCTCGACG GCGCCTTCCA TCGCATCACC
TCTGCCTCGT CCCTGCTCGG CCTCAGCGAC GAGACCGCGA CCATCTTCAA GGAGATCACC
GGCTACGACC GCGTCATGGT CTACCGCTTC GACGACGAGG GCCATGGCGA GGTGCTGTCG
GAACGGCGGC GGCCCGAGCT CGAAGCCTTT CTCGGCAATC GCTATCCCGC CTCGGACATT
CCGCAGATCG CACGCCGCCT CTACGAGCGC AACCGCGTGC GCCTGCTGGT CGACGTCAAC
TACACACCGG TGCCGCTGCA GCCGCGTATC TCGCCGCTGA ACGGGCGCGA CCTCGACATG
TCGCTGAGCT GCCTGCGCAG CATGTCGCCC ATTCATCAGA AATATCTGCA GAACATGGGC
GTGGGCGCCA CGCTGGTGTG CTCGCTGATC GTCAGCGGCC GGCTCTGGGG CCTGGTCGCC
TGTCATCACT ATGAGCCGCG CTTCGTGCCG TTCGATATCC GCGCGGCCTG CGAGGCGCTG
GCCGAGACCT GCGCGATCCG GATCGCTGCG CTCGAAAGTT TCGCGCAGAG CCAGTCCGAG
CTGGTCGTCC GCCGGCTCGA GCAGCGGCTG GTCGAGGCGG TCTCGCGGGA CGGCGAATGG
CAGGCGGCGT TGTTCGACGG CTCACAGTCG CTGCTGCAGC CGCTCGGCGC GACCGGCGCC
GCGCTGCTGT TCGAAGGCCA GGTCACCACC GCCGGCGACG TTCCATCGAC GCAGCGCATC
CGCGATCTCG CCGCTTGGCT CGATCGCCGG CGCAAGACGA CGGAGCCGGC GCCGCAAGCT
CTGACGGTGA CGGCCGCGCT GACGCTGGAC GAACCGTCTT TCATGGATCT CCGCCCGATT
GCGAGCGGCC TGATCGCAGC TCCGCTTTCG GCGAGCGAGG GCGAGTACCT GCTCTGGTTC
AGGCCTGAAC AGGTGAGGAC GGTGACCTGG GGCGGCGATC CGCTCAAGGC GGTCATCATC
GGCGACGACC CATCGGATCT GTCGCCGCGC CGCTCCTTCG CGCAATGGCA CCAGCTGGTC
GAAGGCAAGT CGGAACCATG GTCACCGGCC GAGCTGGCCT CGGCGCGGTT GATCAGCGAG
ACCGTGGCCG ACGTCGCGCT GCAGCTTCGC TCGGTGCGCA TGGTGATTGC GCAGGACCAG
CTTGCCACGA TCAGCGCCCA GGTGCTGCGG TCGGAGCAAC CGGTGATCAT CGCCGATGTC
GAAGGTCGCA TCCTGCTCAT GAACGAGGCG TTCGAGCAGC AGCTGCGCGC CTCGCATCCG
CACATTCCGC ATTTGCGCGA TCTCGGCAGC TACTTCGCGG CCCCGGCGGA ATTCCGCGCC
AATCTCGACG ACCTCATGCG CAACAAGCGC AGTTGGCGTG GCGAGCTGAC GCTGAGCGGC
GCGGCCTCGC AGCGACCGCT GATGGTGCGC GCCGACCCAG TCATTGCGCC CTACGACCGC
GTCCTCGGCT TCGTGCTGAT CTTCTCAGAC CTGACGGAAC GCAAGACGGC CGAGGCGGCC
CGCGCGCGCT TCCAGGAGGA GATAGATGGC GCGCGGCGGC CGAGTCTTCG GCTCGATCAG
CGCGCCAGCC TGATCTACAA GGAACTGGCG GCCTCGACGG TGGAGAATGC GCAGCTCGCC
GCGCTCGAAG TGACGCATGG CGCCGAAGCG GGCGGCATGC CCGAGATGCT GGAGAGCATC
CGGAATTCCA CCGCGCGGAC GCTGGGCATC CTCGAGCACC TGGTGTGGTA TCGCTCGCAG
AGCGAGGAGT GA
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| Protein sequence | MPVPLTTPAF GHATLANCER EQIHLAGSIQ PHGILLAVKE PDNLVIQAST NAAAFLNTNS
VVGRPLRDLG GDLALQILPH LNGPLHLAPM TLRCAVGTPP RRVDCTIHRP SNGGLIIELE
PATKTTNIAP ALDGAFHRIT SASSLLGLSD ETATIFKEIT GYDRVMVYRF DDEGHGEVLS
ERRRPELEAF LGNRYPASDI PQIARRLYER NRVRLLVDVN YTPVPLQPRI SPLNGRDLDM
SLSCLRSMSP IHQKYLQNMG VGATLVCSLI VSGRLWGLVA CHHYEPRFVP FDIRAACEAL
AETCAIRIAA LESFAQSQSE LVVRRLEQRL VEAVSRDGEW QAALFDGSQS LLQPLGATGA
ALLFEGQVTT AGDVPSTQRI RDLAAWLDRR RKTTEPAPQA LTVTAALTLD EPSFMDLRPI
ASGLIAAPLS ASEGEYLLWF RPEQVRTVTW GGDPLKAVII GDDPSDLSPR RSFAQWHQLV
EGKSEPWSPA ELASARLISE TVADVALQLR SVRMVIAQDQ LATISAQVLR SEQPVIIADV
EGRILLMNEA FEQQLRASHP HIPHLRDLGS YFAAPAEFRA NLDDLMRNKR SWRGELTLSG
AASQRPLMVR ADPVIAPYDR VLGFVLIFSD LTERKTAEAA RARFQEEIDG ARRPSLRLDQ
RASLIYKELA ASTVENAQLA ALEVTHGAEA GGMPEMLESI RNSTARTLGI LEHLVWYRSQ
SEE
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