Gene BBta_6417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6417 
SymbolbchN 
ID5154252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6686230 
End bp6687516 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID640561117 
Productlight-independent protochlorophyllide reductase subunit N 
Protein accessionYP_001242233 
Protein GI148257648 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01279] light-independent protochlorophyllide reductase, N subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.577987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC ATGCGCAGGC CTGTGCCGTG ACATCAGCCG CTTCGCCGGA CGGCGTGCTG 
CGCGAGCGCG GCCAGCGCGA AGTGTTCTGT GGATTGACCG GCATCGTCTG GCTCCACAGG
AAAATTCAGG ACGCCTTCTT CCTCGTTGTC GGCTCGCGCA CCTGCGCGCA TCTGATTCAG
TCGGCCGCCG GCGTGATGAT CTTCGCCGAG CCGCGCTTCG CCACCGCCAT CATGGAGGAG
CGCGATCTCG CCGGCCTGGT CGACGCCAAT GACGAGCTCG ACCGCATCGT CACCCAGCTC
CTGGCGCGGC GGCCGGAGAT CAAGCTGCTG TTCCTGGTCG GCTCCTGCCC GTCGGAGGTG
ATCAAGCTCG ATCTGTCGCG CGCGGCGCTG CGCCTGTCGC AGCGCTTCTC GCCCGGCGTC
CGCGTGCTCA ACTACTCCGG CAGCGGCATC GAGACGACGT TCACCCAGGG CGAGGATGCC
TGCCTCGCAT CATTGGTGCC GGTGCTGCCG GCGGCGGATC GCTCGGCGCG GCCGTCGCTG
CTCGTGGTCG GCGCGCTGGC GGATGTCGTT GAGGACCAGT TCAAGCGGAC CTTCGCCGCG
CTCGGCATCG ACCAGGTCGC ATTCCTGCCG CCGCGGCGCT CGTCGGAACT GCCGGCGATC
GGCCCGGAGA CACGCGTGCT GCTGGCGCAG CCGTTCCTCG GCGACACCGC GCGCGCGCTG
GAGGAGCGCG GCTGCCGCCG CATCGCGGCG CCGTTCCCGC TCGGCGGCGA AGGCACCGCG
TTGTGGCTCG CGGCCGCGGC CGACGCCTTC GGCGTCTCGC ACGCCCATGT CGAACGGACC
ATCGCGCCGC TCAAGGCGCG AGCGGAGCGG GCGCTGGCGC GCTATCGCGC GCAGCTCGCC
GGCAAGCGCG TGTTCCTGTT TCCGGATTCG CAGATCGAGA TCCCGCTGGC GCGTTTCCTG
TCGCGCGAGA TCGGCATGGA GCTGGTCGAG GTCGGCACGC CCTATCTGCA TCGCGATCAT
CTTGCTTCCG AGCTGGCGCT GCTGCCGGGT GGCACGCAAC TCAGCGAGGG CCAGGATGTC
GAGCGGCAGC TCGATCGTTG CCGTGACGCG CGTCCCGATC TCGTTGTCTG CGGGCTCGGC
CTCGCCAATC CGCTGGAGGC CGAGGGGCTC ACGACGAAGT GGTCGATCGA GCTGATCTTC
ACGCCGATCC AGGGTTTCGA GCAGGCCGGC GATCTCGCCG AGCTGTTCGC GCGGCCGTTG
CTGCGCCAAA CCAGATTGGC GGTGTGA
 
Protein sequence
MNAHAQACAV TSAASPDGVL RERGQREVFC GLTGIVWLHR KIQDAFFLVV GSRTCAHLIQ 
SAAGVMIFAE PRFATAIMEE RDLAGLVDAN DELDRIVTQL LARRPEIKLL FLVGSCPSEV
IKLDLSRAAL RLSQRFSPGV RVLNYSGSGI ETTFTQGEDA CLASLVPVLP AADRSARPSL
LVVGALADVV EDQFKRTFAA LGIDQVAFLP PRRSSELPAI GPETRVLLAQ PFLGDTARAL
EERGCRRIAA PFPLGGEGTA LWLAAAADAF GVSHAHVERT IAPLKARAER ALARYRAQLA
GKRVFLFPDS QIEIPLARFL SREIGMELVE VGTPYLHRDH LASELALLPG GTQLSEGQDV
ERQLDRCRDA RPDLVVCGLG LANPLEAEGL TTKWSIELIF TPIQGFEQAG DLAELFARPL
LRQTRLAV