| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6399 |
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| Symbol | cbbT |
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| ID | 5154109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6664839 |
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| End bp | 6666851 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640561099 |
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| Product | transketolase |
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| Protein accession | YP_001242215 |
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| Protein GI | 148257630 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0195479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGCAAAAGC CTGCCGCAAA GGCTGATCCG GCTCACGCCG AGATGGCGAA CGCCATCCGC
TTTCTGGCGA TCGATGCCGT GGAGAAGGCG AAGTCGGGTC ATCCGGGCAT GCCGATGGGC
ATGGCCGACG TCGCCACCGT GCTGTTCTCG CGCTTCATGA AGTTCGATCC GGCCGATCCG
GCCTGGCCCG ATCGCGACCG CTTCGTGCTG TCGGCCGGTC ATGGCTCGAT GCTGCTCTAT
GCGCTGCTGC ATCTGACCGG CTACGAGGCG GTCACGATCG ACGAGATCAA GCGATTCCGG
CAGTGGGGCG CCAAGACGCC CGGGCATCCG GAATATGGTC ACACGCCCGG CGTCGAGACC
ACGACCGGCC CGCTCGGGCA GGGCATCGCC ACGGCTGTCG GCATGGCGCT GGCCGAGCGC
CTGATGAACG CGCGCTATGG CGACGAGTTG ATCGATCATT ACACCTACGT CATTGCCGGC
GACGGTTGCC TGATGGAGGG CATCAGCCAC GAGGCGATTT CGCTCGCCGG GCATCTGCGG
CTCAACCGCC TGATCGTGCT GTTCGATGAC AACGGCATCT CGATCGACGG CTCGACCGGA
CTGGCCTGTT CGGACGATCA GCTCGGCCGC TTCGCCGCCT CGGGCTGGGC GACGTCCCGT
ATCGACGGCC ATGATCCCGA AGCGATTGCG GCTGCGATCG CCGCGGCCCG GCAGAGCGAC
CGGCCCACGA TGATCGCCTG CCGCACGACG ATCGGCTTCG GCTCGCCTGG ACGCCAGGGT
TCGGAGAAGG CGCATGGCGC GCCGCTCGGG CCGGAGGAGG TCGAGAAGAC TCGCGCCGCC
CTGCACTGGC CGCACCGGCC GTTCGAGATT CCGGCCGATG TGCTGGTGAG CTGGCGCGAG
ATTGGCGCGC GCGGCCACAG CGTGCGGCAG GCCTGGAAGG AGCGGGCGCG AAAGCTGTGC
ACTGCGGACC GCTCGCCATG CCACGATGCG CTGAACAAGA AGCTGCCGGC GGCCTATACC
GAGCGCATGG CGCAGTTCAT CGCGCAGCTC ACGGCCGAGC GGCCGAAGAT CGCGACGCGC
CAGGCCTCGC AGAACGTCAT CGATGTGATC GCGACGGTGC TACCCAATCT GCTCGGCGGC
TCCGCGGATC TGACCCACTC GAATTTGACC AAGGCGAAGA CACACAAGTC GGTGACGCCG
GCGACCATGG ACGGCAACTA CGTGCATTAC GGCGTTCGTG AGCATGCAAT GGCGGCGGCG
ATGAACGGTA TCGCGCTGCA TGGCGGCTTC ATTCCTTATG GCGGCACCTT CCTGGCCTTT
GCCGACTACA GCCGGCCGGC GATCCGCCTC GCTGCGCTGA TGGGCATCCG CGTCATCCAT
GTGATGACTC ACGATTCCAT CGGCCTCGGT GAGGACGGGC CCACGCATCA GCCGGTCGAG
CATGTCGCCA GCCTGCGTGC CATTCCCAAT CTCCTGGTGT TCCGTCCGGC TGATGCGGTC
GAGACGGCGG AAGCCTGGGA CTGCGCGCTG CGCGCCGAAA CCTCGCCTTC GGTGCTCTGC
CTGTCGCGCC AGGCGCTGCC GGCCTTCCGC ACCGAGGCAT CCGACCACAA CAAGGTGGCG
CTCGGCGCCT ATGTGGTTGT GGAGCCGGAA ACTCGCCGCG ACGTCACTCT GATCGCGACC
GGCTCTGAGG TGGCGATCGC GCTGGAGGCG GCGAAGCTGC TGGCGGCCGA AGGCGTGCAT
GCTGCAGTGG TGTCGGCGCC GTGTTTCGAA CTGTTCCGCC AGCAGACGGC GGAGTATCGC
GCTCAAGTGC TCGGTAACGC GCCGCGCATC GGCGTCGAGG CTGCCATCGA GGGCGACTGG
GCGCGCTGGC TCGGCGACAG CGGCGAGTTC GTGGGCATGC AGGGCTTCGG CGCCTCGGCG
CCTGCCGATG TGCTGTACCG AGAGTTCGGC ATCACGCCCG CGGCGGTGGC CGATGCCGCC
ATGCGCAACA TCATCCGGGC GCGGGCGTCC TGA
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| Protein sequence | MQKPAAKADP AHAEMANAIR FLAIDAVEKA KSGHPGMPMG MADVATVLFS RFMKFDPADP
AWPDRDRFVL SAGHGSMLLY ALLHLTGYEA VTIDEIKRFR QWGAKTPGHP EYGHTPGVET
TTGPLGQGIA TAVGMALAER LMNARYGDEL IDHYTYVIAG DGCLMEGISH EAISLAGHLR
LNRLIVLFDD NGISIDGSTG LACSDDQLGR FAASGWATSR IDGHDPEAIA AAIAAARQSD
RPTMIACRTT IGFGSPGRQG SEKAHGAPLG PEEVEKTRAA LHWPHRPFEI PADVLVSWRE
IGARGHSVRQ AWKERARKLC TADRSPCHDA LNKKLPAAYT ERMAQFIAQL TAERPKIATR
QASQNVIDVI ATVLPNLLGG SADLTHSNLT KAKTHKSVTP ATMDGNYVHY GVREHAMAAA
MNGIALHGGF IPYGGTFLAF ADYSRPAIRL AALMGIRVIH VMTHDSIGLG EDGPTHQPVE
HVASLRAIPN LLVFRPADAV ETAEAWDCAL RAETSPSVLC LSRQALPAFR TEASDHNKVA
LGAYVVVEPE TRRDVTLIAT GSEVAIALEA AKLLAAEGVH AAVVSAPCFE LFRQQTAEYR
AQVLGNAPRI GVEAAIEGDW ARWLGDSGEF VGMQGFGASA PADVLYREFG ITPAAVADAA
MRNIIRARAS
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