| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6391 |
|---|
| Symbol | |
|---|
| ID | 5154177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6657177 |
|---|
| End bp | 6658346 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640561091 |
|---|
| Product | alpha/beta superfamily hydrolase |
|---|
| Protein accession | YP_001242207 |
|---|
| Protein GI | 148257622 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.892369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACCAG GTTCCAAGCA GGCGGGCAGC GTGGCCGTCG CAATCTGCGT TGCCGCGCTG
CTGCTCTCGG CCTGCGCGTC CGTTCAGCGC GCGACCTACT CGGCGGATGA GGCCAAGCGG
GCCCGCATCG ACGGCTTCGG CGCAATCCGC ATGTGGGCCG ATGCGCCCCC CGAGACCTTC
AACGTGGCGT CGTTCACGCC GAGGCCACAG CCGAACCGGC CCTTCGCCTA TCTTGCGCTG
TCGGGCGGCG GCGGCGACGG CGCGTTCGGC GCCGGAATTC TGAACGGCTG GAGCGAGAGC
GGCGCGCGTC CTGAATTCAC GGTCGTCTCG GGCGTGAGCA CTGGCGCCCT GATCGCGCCG
TTTGCGTTTC TCGGACCGGC TTACGATCCG ACGCTGAAGG AGATGTATAC GAGCGGCCTC
GCCAGTTCGT TCGCCGCCTC TCCCAATGCG CTGGGGGCGG TATTTGGCTC CGCACTGTTC
GATAACCAGC CGCTTCGCGA CGCCATCAGC CGGTATGCAA CGGCCGAACT GCTAGAAGCG
ATTGCCAAGG AACACGCAAA GGGGCGACGG CTGTTCGTCG TGACCACCGA TCTGGATGCG
GGCCGCCCGG TGCTATGGAA CATGGGTGAA ATCGCGTCGG CGCGAACGCC GCAGGCGCTC
GCTTTATTCC GGCAGGTGCT GACGGCATCG GCCAGCGTTC CCGTCGCCTT CCCGCCATCG
CTGATCGCCG CCTCCTCCGA CGGCAAGCCG ATCGAGGAGA TGCATGTCGA CGGCGGCGTT
TCGACGCAGG TCTTCACCTT TCCCGATCGC CTGCTGATGC AGCCCGACAC CTCTCGGCGC
ATGGCGGCAC CGAAACCGGC GATTTACATC ATCATGAACG GCCGGATCTC GACCGAATTC
CAGCCCGTCG AGAACAGCAC CAAGGCAATC GCGATCCGCT CACTGGGAAT GAAGAGCAAG
CGCGAGATCC AGGGCTATCT GTCGGCGACC TATCAATTTG CCAAGCACAA CGGGCTCGCC
TTCAACATGA CCGCGATCGA CTCATCCGTT CCCGAAGGCC CGGGAGTGGG ATTCGATACC
GACTATATGC GCTCGTTATA TGCACTTGGC TATGACAGCG CCCGCTCCGG GCAGTTCTGG
GTCCAGACCC CCGCTCCGCC GCGATCTTGA
|
|---|
| Protein sequence | MKPGSKQAGS VAVAICVAAL LLSACASVQR ATYSADEAKR ARIDGFGAIR MWADAPPETF
NVASFTPRPQ PNRPFAYLAL SGGGGDGAFG AGILNGWSES GARPEFTVVS GVSTGALIAP
FAFLGPAYDP TLKEMYTSGL ASSFAASPNA LGAVFGSALF DNQPLRDAIS RYATAELLEA
IAKEHAKGRR LFVVTTDLDA GRPVLWNMGE IASARTPQAL ALFRQVLTAS ASVPVAFPPS
LIAASSDGKP IEEMHVDGGV STQVFTFPDR LLMQPDTSRR MAAPKPAIYI IMNGRISTEF
QPVENSTKAI AIRSLGMKSK REIQGYLSAT YQFAKHNGLA FNMTAIDSSV PEGPGVGFDT
DYMRSLYALG YDSARSGQFW VQTPAPPRS
|
|---|
| |