| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6378 |
|---|
| Symbol | |
|---|
| ID | 5154214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6638634 |
|---|
| End bp | 6639263 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640561080 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001242196 |
|---|
| Protein GI | 148257611 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.266594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTGC CTCAATCTGT TGCAACGCTC ATCGCCGGCG TCGGGGTTGG GCTGACGGTC
GCGGCGCCGG TCGGACCGAT GGGGATCCTC TGCATTCAGC GGACATTGAC CTCCGGCGCA
GCGGCGGGGC TGGCGACGGG GTTGGGCGCG GCCACGGTTC ACCTGGCCTA CAGCGCGCTC
GCAGTCGCCG GCATCGGAGT GATCGTCCAG CCGTGGGTCG AAACCAATTC GCTCGTGCTC
GGCACACTGT CGGGCTTCGC CCTGCTCTGG TTCGCCATGC GGATTCGCCA GCAGCCTGTC
GCGCTTCCCG CCACGGATCG AGGCGATCAC ATCCGCCTGA TCAGGGCCTA TGCGAGCGCG
ATCGGACTCG GCGTGACCAA CCCGCTTACG ATCGTCCTGT TCTGCGCCGC GCTGCATACG
CTGGTCGGGC ATTCGGCAGG ACTTCTGCTG ACGGCGGGTG TGTTCCTCGG TTCGGCGCTG
TGGTGGACCC TTCTGAGCAC GACGATAGCC ATCGTCCGCC TGCGCTTCGA TTCGGACATC
CTCAACATGA GCAACAAGCT GGCCAGCCTG CTGCTGATGG GGCTCGGCGC GCTGGCCCTC
GCCAAGGCGT GTGGACGCCT GATGACCTGA
|
|---|
| Protein sequence | MSLPQSVATL IAGVGVGLTV AAPVGPMGIL CIQRTLTSGA AAGLATGLGA ATVHLAYSAL
AVAGIGVIVQ PWVETNSLVL GTLSGFALLW FAMRIRQQPV ALPATDRGDH IRLIRAYASA
IGLGVTNPLT IVLFCAALHT LVGHSAGLLL TAGVFLGSAL WWTLLSTTIA IVRLRFDSDI
LNMSNKLASL LLMGLGALAL AKACGRLMT
|
|---|
| |