Gene BBta_6358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6358 
Symbol 
ID5153568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6622296 
End bp6623270 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content56% 
IMG OID640561064 
Productputative sulfonate ABC transporter, substrate-binding protein 
Protein accessionYP_001242180 
Protein GI148257595 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTC TCTCTTTCGG CACGACCCGT CGGCAGCTAT TAACGGGAAT TAGCGCGCTG 
GGCGGACTTG GCGCCATTGG TGCCACGCGC TCGCTCGCGC AGGAATCGAT CGAGATACAG
ATCGGCGAGG GCACAGTCCC CGACTACACG CATTTTTATG TCGCCGATGA CCTCGGTCTG
TGGAGCAAGC AAGGTCTAAA GGCGACCTCG ACGATGTTTC CCTCGGGGCG CATTGCTTTG
GATGCACTTG TCAGCGGCCA AGTCAAAATT GCAACGTGCG CGGAAACACC GGTCATGTTC
GCTGCCATCA ATGAGATTCC CGTAAGGGTA ATCGCGTCTG TCATTAAGTA TGAGCCGTTC
GATCTGGTCG TCGGCCCAAA CATACAGAGC CTGGACGAAC TCAAGGCAAA GCGCATTGGC
TACTCCCAAG GAACCAATGC TCACTACTAC CTTGCAAGTT TGCTCAGGAG CAAAGGCTTG
ACCGCAGCTG ACGTTGCCGC GGTGAATCTA CCGGTTGCCA ATTTCGTCCC AAGTCTCGTC
GGCGGCGCTA TTGACGCTTT CGTTTGGAGC GAGCCACTCA TCACCGCGGC GCTCAAGCAG
GGGCCGTTCA AGCGTTTGCG AAGCGAGGGG CTGTACAGTG CCTATGGATG CGTCGTCGCG
ATGCAATCGA CCATCGACAG TAACCCGGAG ATGCTGATTA GGGCCGTGAG AACACTCGTG
GCCGCTCATG CGGTCGTGAA GAGCGCGCCC GAACAGGCAA TGGACATCAT ATCAGCAAAG
CTCAAGCTGG AGCGCTCGTC TGTTCCCGAG CTCTGGAAAG ACTTGCATTT CGGCGTCGGC
ATAAACCGCG CATCGATGAC CGTTGATCTG GTCAAGGAAG CTGAATGGGC ATTCGCGAAT
AATCTCGTGA AGCCTGGAGC AAAAATGCCG TCATTCGACC AGGTCGTGAC GGATAGCATC
GTGAAACGAG TATGA
 
Protein sequence
MTPLSFGTTR RQLLTGISAL GGLGAIGATR SLAQESIEIQ IGEGTVPDYT HFYVADDLGL 
WSKQGLKATS TMFPSGRIAL DALVSGQVKI ATCAETPVMF AAINEIPVRV IASVIKYEPF
DLVVGPNIQS LDELKAKRIG YSQGTNAHYY LASLLRSKGL TAADVAAVNL PVANFVPSLV
GGAIDAFVWS EPLITAALKQ GPFKRLRSEG LYSAYGCVVA MQSTIDSNPE MLIRAVRTLV
AAHAVVKSAP EQAMDIISAK LKLERSSVPE LWKDLHFGVG INRASMTVDL VKEAEWAFAN
NLVKPGAKMP SFDQVVTDSI VKRV