Gene BBta_6351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6351 
Symbol 
ID5153638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6612669 
End bp6613880 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content65% 
IMG OID640561056 
Productputative branched-chain amino acid ABC transporter, substrate-binding protein 
Protein accessionYP_001242173 
Protein GI148257588 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.182816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA CTGCTTTGAA GCGCGCGGCG TGGGCGGCCG CGGCGCTGCT GGTCACGACG 
GCAGCGCAGG CCGAGATCTC CGACAACGTT GTCAAGATCG GCGTGCTCAG CGACATGAAC
GGCCCCGCCT CGACGCCGAC CGGCCAGGGC TCGGTCACCG CGGCGCAGAT GGCCGTCGAC
GATTTCGGCG GCAAGGTGCT GGACAAGCCG ATCAGCGTCA TCGTTGGCGA CCATCAGCTC
AAGCCCGACA TCGGCGCCGC GATCGCGCGC CGCTGGTATG ACACCGAGCA GGTCGATCTC
ATCGTCGACG TACCGGTCTC GGCGGTCGGC CTGGCGGTGC AGACCATCGC CACCGAGAAG
AAGCGGCTGT TCATCACCCA ATCGACCGGT GCGGCCGATT TCCACGGCAA GTTCTGCTCG
CCTTACGCCA TGCAATGGGT GTTCGACACC AGGGCACTGG CCACCGGCAC CGCGAAGGAG
GTCGTCAAGC GCGGCGGCGA CAGCTGGTTC TTCATCACCG ACGACTATGC CTTCGGCCAT
TCGCTGGAGC GCGATGCGGC TGGCGTCGTC ACCGCTAATG GCGGCAAGGT CGTGGGCGCG
GTGCGCCCGC CCTTCGCGAC GCCCGATTTG TCCTCCTTCA TCCTGCAGGC GCAGGCCTCC
AAGGCCAAGA TCATCGGCAT CGCCGCAGGT CCCCCGAACA ACATGAACGA GATCAAGACG
GCGGCGGAAT TCGGCCTGCT CAAGGGCGGC CAGCAGATGG CGGCGCTGCT GGCGCTGATC
ACCGACATTC ATTCGCTGGG ACTGCCGGCG GCGCAGGGCC TCCTGCTCAC CACCTCGTTC
TATTGGGACA TGGACGACAA GACGCGCGAA TGGTCGAAGC GCTATTTCGC CAAGATGAAC
CGGATGCCGA CGATGTGGCA GGCGGGCGTC TACTCCGCGG TCACGCATTA TCTCAACGCG
GTCAGAGCTG CCGGCAGCGA CGATCCGCTG GCCGTGGCCG CGAAGATGCG CGAGACCCCG
GTCGAGGACT TCTTCGCCCG CAACGGCCGG CTGCGCGCTG ACAATCTGAT GGTGCACGAT
CTCGTGCTGG CGCAGGTCAA GTCGCCGGAC GAGAGCAAAT ATCCGTGGGA CTACTACAAG
ATCCTTGCGA CCATCAAAGG CGAGGAGGCG TTCGGCCCGC CCGATCCGGC CTGCCCGCTG
ATCAAGAGAT GA
 
Protein sequence
MQLTALKRAA WAAAALLVTT AAQAEISDNV VKIGVLSDMN GPASTPTGQG SVTAAQMAVD 
DFGGKVLDKP ISVIVGDHQL KPDIGAAIAR RWYDTEQVDL IVDVPVSAVG LAVQTIATEK
KRLFITQSTG AADFHGKFCS PYAMQWVFDT RALATGTAKE VVKRGGDSWF FITDDYAFGH
SLERDAAGVV TANGGKVVGA VRPPFATPDL SSFILQAQAS KAKIIGIAAG PPNNMNEIKT
AAEFGLLKGG QQMAALLALI TDIHSLGLPA AQGLLLTTSF YWDMDDKTRE WSKRYFAKMN
RMPTMWQAGV YSAVTHYLNA VRAAGSDDPL AVAAKMRETP VEDFFARNGR LRADNLMVHD
LVLAQVKSPD ESKYPWDYYK ILATIKGEEA FGPPDPACPL IKR