Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6351 |
Symbol | |
ID | 5153638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6612669 |
End bp | 6613880 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640561056 |
Product | putative branched-chain amino acid ABC transporter, substrate-binding protein |
Protein accession | YP_001242173 |
Protein GI | 148257588 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.182816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCTCA CTGCTTTGAA GCGCGCGGCG TGGGCGGCCG CGGCGCTGCT GGTCACGACG GCAGCGCAGG CCGAGATCTC CGACAACGTT GTCAAGATCG GCGTGCTCAG CGACATGAAC GGCCCCGCCT CGACGCCGAC CGGCCAGGGC TCGGTCACCG CGGCGCAGAT GGCCGTCGAC GATTTCGGCG GCAAGGTGCT GGACAAGCCG ATCAGCGTCA TCGTTGGCGA CCATCAGCTC AAGCCCGACA TCGGCGCCGC GATCGCGCGC CGCTGGTATG ACACCGAGCA GGTCGATCTC ATCGTCGACG TACCGGTCTC GGCGGTCGGC CTGGCGGTGC AGACCATCGC CACCGAGAAG AAGCGGCTGT TCATCACCCA ATCGACCGGT GCGGCCGATT TCCACGGCAA GTTCTGCTCG CCTTACGCCA TGCAATGGGT GTTCGACACC AGGGCACTGG CCACCGGCAC CGCGAAGGAG GTCGTCAAGC GCGGCGGCGA CAGCTGGTTC TTCATCACCG ACGACTATGC CTTCGGCCAT TCGCTGGAGC GCGATGCGGC TGGCGTCGTC ACCGCTAATG GCGGCAAGGT CGTGGGCGCG GTGCGCCCGC CCTTCGCGAC GCCCGATTTG TCCTCCTTCA TCCTGCAGGC GCAGGCCTCC AAGGCCAAGA TCATCGGCAT CGCCGCAGGT CCCCCGAACA ACATGAACGA GATCAAGACG GCGGCGGAAT TCGGCCTGCT CAAGGGCGGC CAGCAGATGG CGGCGCTGCT GGCGCTGATC ACCGACATTC ATTCGCTGGG ACTGCCGGCG GCGCAGGGCC TCCTGCTCAC CACCTCGTTC TATTGGGACA TGGACGACAA GACGCGCGAA TGGTCGAAGC GCTATTTCGC CAAGATGAAC CGGATGCCGA CGATGTGGCA GGCGGGCGTC TACTCCGCGG TCACGCATTA TCTCAACGCG GTCAGAGCTG CCGGCAGCGA CGATCCGCTG GCCGTGGCCG CGAAGATGCG CGAGACCCCG GTCGAGGACT TCTTCGCCCG CAACGGCCGG CTGCGCGCTG ACAATCTGAT GGTGCACGAT CTCGTGCTGG CGCAGGTCAA GTCGCCGGAC GAGAGCAAAT ATCCGTGGGA CTACTACAAG ATCCTTGCGA CCATCAAAGG CGAGGAGGCG TTCGGCCCGC CCGATCCGGC CTGCCCGCTG ATCAAGAGAT GA
|
Protein sequence | MQLTALKRAA WAAAALLVTT AAQAEISDNV VKIGVLSDMN GPASTPTGQG SVTAAQMAVD DFGGKVLDKP ISVIVGDHQL KPDIGAAIAR RWYDTEQVDL IVDVPVSAVG LAVQTIATEK KRLFITQSTG AADFHGKFCS PYAMQWVFDT RALATGTAKE VVKRGGDSWF FITDDYAFGH SLERDAAGVV TANGGKVVGA VRPPFATPDL SSFILQAQAS KAKIIGIAAG PPNNMNEIKT AAEFGLLKGG QQMAALLALI TDIHSLGLPA AQGLLLTTSF YWDMDDKTRE WSKRYFAKMN RMPTMWQAGV YSAVTHYLNA VRAAGSDDPL AVAAKMRETP VEDFFARNGR LRADNLMVHD LVLAQVKSPD ESKYPWDYYK ILATIKGEEA FGPPDPACPL IKR
|
| |