| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6337 |
|---|
| Symbol | kdpB |
|---|
| ID | 5153187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6601125 |
|---|
| End bp | 6603242 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640561044 |
|---|
| Product | potassium-transporting ATPase subunit B |
|---|
| Protein accession | YP_001242161 |
|---|
| Protein GI | 148257576 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2216] High-affinity K+ transport system, ATPase chain B |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0407922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCG TCAAACTGCA GAAGCGCTCG TCGATGTCGA CGATGCTCGA TGCGAAGATC
GTGCTGCCCG CCATCAAGGC CGCTTTCGTC AAGCTCGATC CGCGGCTGAT GATCAAGAAC
CCCGTGATGT TCGTGGTCGA GATCGTCGCC GCGCTCACCA CCGTCATCTT CCTGCGCGAT
GTCGTGACCG GCGGCGCGAA TCTCGGCTTC ACCTTCCAGA TCATCCTCTG GCTGTGGTTC
ACCGTGCTGT TCGCGAATTT CGCCGAGGCC GTCGCCGAAG GCCGCGGCAA GGCGCAGGCG
GATTCGCTGC GCAAGACCCG CACCGAGAGC CAGGCCAAGC TGCTGACCGG GACGAGCCCG
GCGGATCACA CCTACCGGCT CGTTGCGGGC ACCAGCCTGA AGGTCGGCGA CATCGTGCTG
GTCGAGGCCG GCGACACGAT CCCGTCCGAC GGCGAGGTGA TCGAAGGCGT CGCCTCGGTC
AACGAGGCGG CCATCACCGG CGAGTCCGCG CCTGTCATCC GCGAATCCGG CGGCGACCGC
TCGGCGGTGA CCGGCGGCAC CCAGGTGCTG TCGGACTGGA TCCGCGTGCG CATCACGGCC
GCGCAGGGCT CGACCTTCAT CGACCGCATG ATCAAGCTGG TCGAGGGTGC CGAGCGGCAG
AAAACGCCGA ACGAGATCGC GCTGAACATC CTGCTCGCCG GCCTCACCAT CATCTTCGTG
TTCGCGACGG TGACGATCCC GAGCTACGCG GCCTATGCCG GCGGCTCGAT CTCGGTGGTC
GTGCTGGTGG CGCTGTTCGT GACCCTGATC CCGACCACGA TCGGCGCACT GTTGTCGGCG
ATCGGCATCG CCGGCATGGA CCGCCTGGTG CGCTTCAACG TGCTGGCGAT GTCCGGCCGC
GCCGTCGAGG CCGCCGGCGA CGTCGACACC CTGCTGCTCG ACAAGACCGG CACCATCACG
CTCGGCAACC GCCAGGCCAC CGCGTTCCGT CCGGTCCGCG GCGTCAGCGA GCAGGAGCTT
GCCGATGCGG CGCAACTCGC CTCGCTCGCC GACGAGACGC CGGAGGGCCG TTCGATCGTC
GTGCTGGCCA AGGAGAAATA CGGCATCCGC GGCCGTGATA TGGCCGAGCT CGGCGCCACC
TTCGTTCCGT TCACGGCGCA GACCCGCATG AGCGGCGTCG ATGCCGGCGG CTCTTCGGTG
CGCAAGGGCG CGGTCGATGC GATCCTCAAT TATATCAGCG GCGGCACGAC CCAGGTCGCG
TCAGGTAACA CGATGCGCGC GATCCAGCCC ATGGAAAGCG AGCTGGCCCG TGAGACCAGA
GCGATCGCCG ATGAGATCGC CAAGTCCGGC GGCACGCCGC TGGCGGTGGC CAAGGACGGC
CGGCTGCTCG GCGTCATCCA GCTGAAGGAC ATCGTCAAGG GCGGCATCCG CGAGCGCTTC
GCCGAGCTGC GCCGCATGGG CATCCGCACC ATCATGATCA CCGGCGACAA TCCGATGACC
GCGGCTGCGA TCGCCGCCGA GGCCGGCGTC GACGATTTCC TGGCTCAGGC GACGCCGGAG
GACAAGCTCC GGCTGATCCG CGACGAACAG GCCAAGGGCA AGCTGGTCGC GATGTGCGGC
GACGGCACCA ACGACGCGCC GGCGCTGGCG CAGGCGGATG TCGGCGTCGC CATGAACACC
GGCACGCAGG CGGCGCGCGA GGCCGGCAAC ATGGTCGACC TCGACTCCAA CCCGACCAAG
CTGATCGAGG TCGTGGAGAT CGGCAAGCAG CTGCTGATGA CGCGCGGTGC ACTGACCACG
TTCTCGATCG CCAATGACGT CGCCAAGTAC TTTGCGATCA TCCCGGCGAT GTTCCTGGCG
TTCTACCCGC AGCTCAACGT GCTGAACGTC ATGAATCTCG CCAGCCCGCA GAGCGCGATC
CTCTCGGCGA TCATCTTCAA CGCGCTGATC ATCATCGCGC TGATCCCGCT GGCGCTGAAA
GGCGTTGCCT ACCGCGCTAT CGGCGCCGGC GCGCTGCTCG GCCGCAACCT GCTGATCTAC
GGCCTCGGCG GCATCATCAT CCCGTTCATC GGCATCAAGG CGATCGACCT GATCGTGACC
GCCTTGCATC TGGCTTAA
|
|---|
| Protein sequence | METVKLQKRS SMSTMLDAKI VLPAIKAAFV KLDPRLMIKN PVMFVVEIVA ALTTVIFLRD
VVTGGANLGF TFQIILWLWF TVLFANFAEA VAEGRGKAQA DSLRKTRTES QAKLLTGTSP
ADHTYRLVAG TSLKVGDIVL VEAGDTIPSD GEVIEGVASV NEAAITGESA PVIRESGGDR
SAVTGGTQVL SDWIRVRITA AQGSTFIDRM IKLVEGAERQ KTPNEIALNI LLAGLTIIFV
FATVTIPSYA AYAGGSISVV VLVALFVTLI PTTIGALLSA IGIAGMDRLV RFNVLAMSGR
AVEAAGDVDT LLLDKTGTIT LGNRQATAFR PVRGVSEQEL ADAAQLASLA DETPEGRSIV
VLAKEKYGIR GRDMAELGAT FVPFTAQTRM SGVDAGGSSV RKGAVDAILN YISGGTTQVA
SGNTMRAIQP MESELARETR AIADEIAKSG GTPLAVAKDG RLLGVIQLKD IVKGGIRERF
AELRRMGIRT IMITGDNPMT AAAIAAEAGV DDFLAQATPE DKLRLIRDEQ AKGKLVAMCG
DGTNDAPALA QADVGVAMNT GTQAAREAGN MVDLDSNPTK LIEVVEIGKQ LLMTRGALTT
FSIANDVAKY FAIIPAMFLA FYPQLNVLNV MNLASPQSAI LSAIIFNALI IIALIPLALK
GVAYRAIGAG ALLGRNLLIY GLGGIIIPFI GIKAIDLIVT ALHLA
|
|---|
| |