| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6324 |
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| Symbol | glgX |
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| ID | 5153300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6583002 |
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| End bp | 6585077 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640561031 |
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| Product | glycosyl hydrolase (glycogen debranching enzyme) |
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| Protein accession | YP_001242148 |
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| Protein GI | 148257563 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.24347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.874434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT CGGCCGGAAG TCACGCCCGT CTCGGTGCCA CCTGGGACGG ACGGGGGACG
AATTTTGCGC TGTTCTCCGC CAATGCCGAG AAGGTCGAGC TGTGCCTGTT CGACAGCCAG
GGCCGGCGCG AGATCGAGCG CATCGAGCTG CCGGAGCGCA CCGAGGATGT CTGGCACGGC
TATCTCAACG ATGTCTCGCC CGGGCAGCTT TACGGCTACC GCGTCTACGG CCCCTACGAG
CCGGAACGCG GCCACCGCTT CAATGCCAAC AAGCTGCTGC TCGACCCCTA TGCAAAGCGG
CTCGCCGGCC GGCTGGTCTG GAGCGACGCA CATTTCGCCT ATCGCGCGGG CTCGCCGCGC
GAGGATCTCT CCTTCGACCG CCGCGACAAT GCGCGCGGCA TGCCCAAGGC CGTCGTCATC
GACGAGACCT TCAATTGGGG CCGCCGCGAG ATGCGGCCGC AAATCCCGTG GGAGGACACG
ATCATCTACG AGGCCCACGT CAAGGGCCTG ACCAACCGAC GCGACGACGT GCCGCCGAAT
CTGCGCGGCA CGTTCGGCGG CCTGTCGGCG CCGGCGATGA TCAAGCACCT GAAGCGGCTC
GGCGTCACGA CCATCGAGCT ATTGCCGATC CACGCCTTCA TCGACGACCG CATGCTGGTC
GAGAAGAAGC TCGTCAACTA CTGGGGCTAC AATACGATCT CGTTCTTTGC GCCGGAGCAG
CGCTACGCGC AGGACAATCC GCTCGATGCC TTCAGAACCA CGGTCGCGCG TCTGCATGAC
GCGGGCATCG AGGTCATGCT CGACGTCGTC TACAACCACA CCGCCGAGGG CAATCATCTC
GGCCCGACGC TGTGCTATCG CGGCATCGAC AACGCGTCGT ATTATTGGCT GCAGCCCGAC
AATCCGCGCT TCTACGACGA TTTCACCGGT TGCGGCTCCT CGGTAAACCT GACGCATCCG
CGCGTGCTGC AGATGGTGAT GGATTCGTTG CGCTACTGGG TCGAGGTCTG CCACGTCGAC
GGCTTCCGCT TCGATCTCGC TACCACCCTC GCGCGCGAGA AGCACGGCTT CGATCGCCGC
AGCGGCTTCC TCACCGCGGT CCGGCAGGAC CCGGTGCTCG CCGGCGTGAA GCTGGTGGCC
GAGCCCTGGG ATGTCGGCCT CGGCGGCTAT CAGGTCGGCG CCTTCCCGTC GCAATGGTCG
GAATGGAACG ATCGCTATCG CAGCGCCATG CGCCGCTATT GGAGCGGCGA AGGCAGCCTG
ATCGGCGAGG TCTCGAGCCG GATGACCGGG TCGTCGGACA TCTTCAATCA CGACGGCCGC
ACCCAGCGCG CCAGCGTCAA CCACGTGACC GTCCATGACG GTTTCACGCT TGCGGATCTG
TTCAGCTACA ACAGCAAGCA CAACGAGGCG AATGGCGAGG ACAATCGCGA CGGCTCCAAC
GACAACCACA GCAACAATTG CGGTCATGAG GGGCCGAGCA GCGATCCCGC CATCAATGCG
CTGCGCCGGC AGTTGCGCAA GAACCAGCTT GCCTGTCTGT TTCTCGCGCA GGGTTTGCCG
CTGCTGCTCG CAGGCGACGA GGTCGGCAAT TCGCAGAGCG GCAACAACAA CGCCTATTGC
CAGGATAACG AGGTCGGCTG GGTCGATTGG AGCGGCATCG GTCGCGAGGG CGACGACCTC
ACCGACTTCA TCGCCCACAT GACCGAACTG CGCCGTCGCT TCGGCCAGAT CCGTGCGCGC
CGCTGGCTCG ACGGTCGTCG CGCGGACGGC AGTTTCGGCG TGCTGTGGCT GACGCCCTCG
GCGGAGGAAA TGACGCAAAC CGACTGGACC TTTCCCGACG GACGATTTCT CGCCTATGTC
CTCGCGCCGG TGGAACAGGA GCAGGCTCCG ATCTTTATCG TTCTGAACGC CGCCCCCGAA
GAGATCGGAT TCAAATTGCC CAAGCTCGCC GAATACAAGA CGTGGCAACA GGTCCTCGAC
ACCACCGAGA TCCAGCAGAA ACCGGCCGAC TTCGCGGCTG GGGCTGATCT CAAGGCGCCG
CCTCGCTCCG TCCTTGCCTA TGCAGGCGTG TCATGA
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| Protein sequence | MRLSAGSHAR LGATWDGRGT NFALFSANAE KVELCLFDSQ GRREIERIEL PERTEDVWHG
YLNDVSPGQL YGYRVYGPYE PERGHRFNAN KLLLDPYAKR LAGRLVWSDA HFAYRAGSPR
EDLSFDRRDN ARGMPKAVVI DETFNWGRRE MRPQIPWEDT IIYEAHVKGL TNRRDDVPPN
LRGTFGGLSA PAMIKHLKRL GVTTIELLPI HAFIDDRMLV EKKLVNYWGY NTISFFAPEQ
RYAQDNPLDA FRTTVARLHD AGIEVMLDVV YNHTAEGNHL GPTLCYRGID NASYYWLQPD
NPRFYDDFTG CGSSVNLTHP RVLQMVMDSL RYWVEVCHVD GFRFDLATTL AREKHGFDRR
SGFLTAVRQD PVLAGVKLVA EPWDVGLGGY QVGAFPSQWS EWNDRYRSAM RRYWSGEGSL
IGEVSSRMTG SSDIFNHDGR TQRASVNHVT VHDGFTLADL FSYNSKHNEA NGEDNRDGSN
DNHSNNCGHE GPSSDPAINA LRRQLRKNQL ACLFLAQGLP LLLAGDEVGN SQSGNNNAYC
QDNEVGWVDW SGIGREGDDL TDFIAHMTEL RRRFGQIRAR RWLDGRRADG SFGVLWLTPS
AEEMTQTDWT FPDGRFLAYV LAPVEQEQAP IFIVLNAAPE EIGFKLPKLA EYKTWQQVLD
TTEIQQKPAD FAAGADLKAP PRSVLAYAGV S
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