Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6323 |
Symbol | glgB |
ID | 5152404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6580859 |
End bp | 6582997 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640561030 |
Product | glycogen branching enzyme |
Protein accession | YP_001242147 |
Protein GI | 148257562 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0125562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.86015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATC TTTCTCCCGA GGCGTTTGCG ATCATCGAAG GTCGGCATGC CGACCCGTTT CGCTATCTCG GTCAACACGA CGTCGACGGC CGGACCGTGA TCCGCGCGTT CCTGCCCGAG GCCTCGCGCG TCGAGGCCGT CGGAGACAAT GGCGAGGTGG CACCGCTTGC ACGGATCCAT GACGCCGGCC TGTTCACCGG GACCATGTCG GGGCCGCAGC GCTATCGGCT GCGGGCGACG TTCGGCGATC ACGTCACCGA CCTCGAGGAC CCCTATCGCT TCCTGCCGAT CCTGACCGAT TTCGACCTGC ATCTGCTCGG CGAAGGCAAC CACGAGCGGC TCTACGACAA GCTCGGCGCC CACCCGATGG TGCTCGACGG CGTCGACGGG GTGGGCTTCG TGGTGCTGGC GCCGAACGCG CGCCGTGTCA GCGTGGTCGG CGATTTCAAC TTCTGGAATG CGCGGCGTCA CCCGATGCGG GTGCGGGGCA ACGGCTATTG GGAGCTGTTC ATTCCCCGAG CCAAAGCCGG GGATCACTAC AAGTTCGACA TTATCGGCCC GCAGGGCGAG CACCTGCCGC TGAAATCGGA CCCGATGGCG TTCGCGGCCG AGATGCGTCC CAAGACGGCA TCCATCGTTG TCGACGAAAC GCGCCTGCCG CGACCGCGGC CGGCCCCCTC GGACATCAAC AAGCTGGACA GGCCGGTTTC GATCTACGAG GTGCATCTCG GGTCCTGGCG GCGCAAGGAC AACAACCAAT GGCTCACCTA TCGCGAGCTG GCCGAGCAGT TGCCGGCCTA TGCGCGAGAC ATGGGTTTTA CGCATATCGA ATTTCTGCCG GTCAGCGAGC ACCCGTTCGA CGGCTCCTGG GGCTATCAGC CGACCGGCCT GTTCGCCCCG ACCAGCCGCT TCGGCAGCCC GGAGGATTTC TGTGCCCTGG TGGACGCCTG CCACCGCGAG GGACTGGCGG TCTGGCTGGA CTGGGTGCCC GGACATTTCC CCGATGATCC GCACGGCCTC GGCCATTTCG ACGGCACGGC GCTGTACGAG CACGCCAACC CGATGCAGGG CCGCCATCTC GATTGGGGCA CCCTGATCTA CAATTACGGC CGCACCGAAG TGGCCAATTT CCTGCGCTCG AACGCGCTGT TCTGGCTGGA GCGCTACGGC ATCGACGGCT TGCGCGTCGA CGCCGTCGCC TCGATGCTCT ATCTCGACTA CAGCCGTCCG TCCGGCGGCT GGATCCCGAA CAAGTATGGC GGGCGGGAGA ACCTGGAGGC GATCGAGTTT CTGCGGCGAA CCAATATCGA GGTGTTCGGC CATTTCCCGC AGGCGACCAC GGCCGCCGAG GAATCGACCG CCTGGCCGCA GGTGTCGCGC CCGGTCGACA TCGGCGGGCT CGGTTTCGGC TACAAGTGGA ACATGGGCTG GATGCACGAC ACCTTGCGCT ATGTCGGCAA GGATCCGATC CACCGCAAAT ATCACCACGG CGAGATCCTG TTCGGCCTGC ACTACGCCTT TTCAGAAAAC TTCATCCTGC CGCTGTCGCA TGACGAGGTC GTGCACGGCA AGCGCTCGAT CCTCGGCCGC ATGCCCGGCG ACGATTGGCA ACGCTTCGCC AATCTGCGCG CCTATTACAG CTTCATGTTC GGACATCCGG GCAAGAAGCT GTTGTTCATG GGCTGCGAGA TCGCCCAGGA GCGCGAGTGG AATCACGATT CCTCGCTCGA TTGGCACCTG CTCGGCGACG CAAAATATGC CGGCATCCAG GCGCTGATCC GCGACCTCAA CCATCTCTAT CGCAATCAGC CCGCTTTGCA TGAGCGGGAT TGCGAGCCGG AGGGGTTTGA CTGGCTGATC ACGGAAGATG CCGACCGCAA TGTCTTCGCC TGGGTGAGAA AGGGCTTCGA TGAGCGGGCT CGCTGCGTCG TGGTCGTGAA CTTTTCGCCC AACGTGTATT ACAATTACCG GGTCCGCGTG CCGCTCGGCG GCACATGGCG GGAAGTCTTC AATTCCGACT CCTCGCATTA TGGCGGCAGC AATGTCGGCA ACGTCGGCCA GGTCCATGCC TCTGAAGATC AACAGCTCAA CCTCATCCTC CCGCCCATGG CAGCGGTATT TCTCGTCCCG GAAGCCTGA
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Protein sequence | MTHLSPEAFA IIEGRHADPF RYLGQHDVDG RTVIRAFLPE ASRVEAVGDN GEVAPLARIH DAGLFTGTMS GPQRYRLRAT FGDHVTDLED PYRFLPILTD FDLHLLGEGN HERLYDKLGA HPMVLDGVDG VGFVVLAPNA RRVSVVGDFN FWNARRHPMR VRGNGYWELF IPRAKAGDHY KFDIIGPQGE HLPLKSDPMA FAAEMRPKTA SIVVDETRLP RPRPAPSDIN KLDRPVSIYE VHLGSWRRKD NNQWLTYREL AEQLPAYARD MGFTHIEFLP VSEHPFDGSW GYQPTGLFAP TSRFGSPEDF CALVDACHRE GLAVWLDWVP GHFPDDPHGL GHFDGTALYE HANPMQGRHL DWGTLIYNYG RTEVANFLRS NALFWLERYG IDGLRVDAVA SMLYLDYSRP SGGWIPNKYG GRENLEAIEF LRRTNIEVFG HFPQATTAAE ESTAWPQVSR PVDIGGLGFG YKWNMGWMHD TLRYVGKDPI HRKYHHGEIL FGLHYAFSEN FILPLSHDEV VHGKRSILGR MPGDDWQRFA NLRAYYSFMF GHPGKKLLFM GCEIAQEREW NHDSSLDWHL LGDAKYAGIQ ALIRDLNHLY RNQPALHERD CEPEGFDWLI TEDADRNVFA WVRKGFDERA RCVVVVNFSP NVYYNYRVRV PLGGTWREVF NSDSSHYGGS NVGNVGQVHA SEDQQLNLIL PPMAAVFLVP EA
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