Gene BBta_6323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6323 
SymbolglgB 
ID5152404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6580859 
End bp6582997 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content64% 
IMG OID640561030 
Productglycogen branching enzyme 
Protein accessionYP_001242147 
Protein GI148257562 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0125562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.86015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC TTTCTCCCGA GGCGTTTGCG ATCATCGAAG GTCGGCATGC CGACCCGTTT 
CGCTATCTCG GTCAACACGA CGTCGACGGC CGGACCGTGA TCCGCGCGTT CCTGCCCGAG
GCCTCGCGCG TCGAGGCCGT CGGAGACAAT GGCGAGGTGG CACCGCTTGC ACGGATCCAT
GACGCCGGCC TGTTCACCGG GACCATGTCG GGGCCGCAGC GCTATCGGCT GCGGGCGACG
TTCGGCGATC ACGTCACCGA CCTCGAGGAC CCCTATCGCT TCCTGCCGAT CCTGACCGAT
TTCGACCTGC ATCTGCTCGG CGAAGGCAAC CACGAGCGGC TCTACGACAA GCTCGGCGCC
CACCCGATGG TGCTCGACGG CGTCGACGGG GTGGGCTTCG TGGTGCTGGC GCCGAACGCG
CGCCGTGTCA GCGTGGTCGG CGATTTCAAC TTCTGGAATG CGCGGCGTCA CCCGATGCGG
GTGCGGGGCA ACGGCTATTG GGAGCTGTTC ATTCCCCGAG CCAAAGCCGG GGATCACTAC
AAGTTCGACA TTATCGGCCC GCAGGGCGAG CACCTGCCGC TGAAATCGGA CCCGATGGCG
TTCGCGGCCG AGATGCGTCC CAAGACGGCA TCCATCGTTG TCGACGAAAC GCGCCTGCCG
CGACCGCGGC CGGCCCCCTC GGACATCAAC AAGCTGGACA GGCCGGTTTC GATCTACGAG
GTGCATCTCG GGTCCTGGCG GCGCAAGGAC AACAACCAAT GGCTCACCTA TCGCGAGCTG
GCCGAGCAGT TGCCGGCCTA TGCGCGAGAC ATGGGTTTTA CGCATATCGA ATTTCTGCCG
GTCAGCGAGC ACCCGTTCGA CGGCTCCTGG GGCTATCAGC CGACCGGCCT GTTCGCCCCG
ACCAGCCGCT TCGGCAGCCC GGAGGATTTC TGTGCCCTGG TGGACGCCTG CCACCGCGAG
GGACTGGCGG TCTGGCTGGA CTGGGTGCCC GGACATTTCC CCGATGATCC GCACGGCCTC
GGCCATTTCG ACGGCACGGC GCTGTACGAG CACGCCAACC CGATGCAGGG CCGCCATCTC
GATTGGGGCA CCCTGATCTA CAATTACGGC CGCACCGAAG TGGCCAATTT CCTGCGCTCG
AACGCGCTGT TCTGGCTGGA GCGCTACGGC ATCGACGGCT TGCGCGTCGA CGCCGTCGCC
TCGATGCTCT ATCTCGACTA CAGCCGTCCG TCCGGCGGCT GGATCCCGAA CAAGTATGGC
GGGCGGGAGA ACCTGGAGGC GATCGAGTTT CTGCGGCGAA CCAATATCGA GGTGTTCGGC
CATTTCCCGC AGGCGACCAC GGCCGCCGAG GAATCGACCG CCTGGCCGCA GGTGTCGCGC
CCGGTCGACA TCGGCGGGCT CGGTTTCGGC TACAAGTGGA ACATGGGCTG GATGCACGAC
ACCTTGCGCT ATGTCGGCAA GGATCCGATC CACCGCAAAT ATCACCACGG CGAGATCCTG
TTCGGCCTGC ACTACGCCTT TTCAGAAAAC TTCATCCTGC CGCTGTCGCA TGACGAGGTC
GTGCACGGCA AGCGCTCGAT CCTCGGCCGC ATGCCCGGCG ACGATTGGCA ACGCTTCGCC
AATCTGCGCG CCTATTACAG CTTCATGTTC GGACATCCGG GCAAGAAGCT GTTGTTCATG
GGCTGCGAGA TCGCCCAGGA GCGCGAGTGG AATCACGATT CCTCGCTCGA TTGGCACCTG
CTCGGCGACG CAAAATATGC CGGCATCCAG GCGCTGATCC GCGACCTCAA CCATCTCTAT
CGCAATCAGC CCGCTTTGCA TGAGCGGGAT TGCGAGCCGG AGGGGTTTGA CTGGCTGATC
ACGGAAGATG CCGACCGCAA TGTCTTCGCC TGGGTGAGAA AGGGCTTCGA TGAGCGGGCT
CGCTGCGTCG TGGTCGTGAA CTTTTCGCCC AACGTGTATT ACAATTACCG GGTCCGCGTG
CCGCTCGGCG GCACATGGCG GGAAGTCTTC AATTCCGACT CCTCGCATTA TGGCGGCAGC
AATGTCGGCA ACGTCGGCCA GGTCCATGCC TCTGAAGATC AACAGCTCAA CCTCATCCTC
CCGCCCATGG CAGCGGTATT TCTCGTCCCG GAAGCCTGA
 
Protein sequence
MTHLSPEAFA IIEGRHADPF RYLGQHDVDG RTVIRAFLPE ASRVEAVGDN GEVAPLARIH 
DAGLFTGTMS GPQRYRLRAT FGDHVTDLED PYRFLPILTD FDLHLLGEGN HERLYDKLGA
HPMVLDGVDG VGFVVLAPNA RRVSVVGDFN FWNARRHPMR VRGNGYWELF IPRAKAGDHY
KFDIIGPQGE HLPLKSDPMA FAAEMRPKTA SIVVDETRLP RPRPAPSDIN KLDRPVSIYE
VHLGSWRRKD NNQWLTYREL AEQLPAYARD MGFTHIEFLP VSEHPFDGSW GYQPTGLFAP
TSRFGSPEDF CALVDACHRE GLAVWLDWVP GHFPDDPHGL GHFDGTALYE HANPMQGRHL
DWGTLIYNYG RTEVANFLRS NALFWLERYG IDGLRVDAVA SMLYLDYSRP SGGWIPNKYG
GRENLEAIEF LRRTNIEVFG HFPQATTAAE ESTAWPQVSR PVDIGGLGFG YKWNMGWMHD
TLRYVGKDPI HRKYHHGEIL FGLHYAFSEN FILPLSHDEV VHGKRSILGR MPGDDWQRFA
NLRAYYSFMF GHPGKKLLFM GCEIAQEREW NHDSSLDWHL LGDAKYAGIQ ALIRDLNHLY
RNQPALHERD CEPEGFDWLI TEDADRNVFA WVRKGFDERA RCVVVVNFSP NVYYNYRVRV
PLGGTWREVF NSDSSHYGGS NVGNVGQVHA SEDQQLNLIL PPMAAVFLVP EA