| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6322 |
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| Symbol | |
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| ID | 5152403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6577557 |
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| End bp | 6580862 |
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| Gene Length | 3306 bp |
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| Protein Length | 1101 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640561029 |
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| Product | putative trehalose synthase |
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| Protein accession | YP_001242146 |
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| Protein GI | 148257561 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.319777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.483748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA TGTCATCCCT GGACGCTCCC AACCTCCAGA CCGCGACCGA TGGCGACGGC
CTTTGGTACA AGGACGCGAT CATCTACCAG CTGCATGTCA AGGCGTTCGC CGACAGCAAC
AATGACGGCA TCGGCGATTT TGTCGGCCTG ACCGAAAAGC TAGATTATCT CCAGGATCTC
GGGGTCACCG CGTTGTGGCT GCTGCCGTTC TATCCCTCCC CTGGGCGCGA CGACGGCTAT
GACATCGCCG ATTACGGCAG CATCAATCCA GATTTCGGCA CGATGAAGGA CTTCAAGCGC
TTCATCCAGG AGGCCCAGCG CCGGGGTTTG CGCGTCATCA CCGAGCTCGT CGTCAATCAC
ACATCCGACC AGCACCATTG GTTCAAGCGC GCCCGGCGCA GCCCGCCGGG ATCCAGCGCC
CGCAACTGGT ATGTCTGGAG CGACACCGAC CAGAAATATC TGGGCACACG GATCATCTTC
ACCGACACCG AGAAGTCGAA CTGGACCTGG GACCCCGAAG CCGGCCAGTT CTACTGGCAT
CGCTTCTTCT CGCACCAGCC GGATCTGAAT TTCGACAATC CGCGAGTGGT GAGCGCGATC
ATCCAGGTGA TGAAGCGCTG GCTCGATGCC GGGGTCGATG GCTTCCGGCT CGACGCGATC
CCCTATCTCT GCGAGCGTGA CGGCACCAAC AACGAGAACC TCCCCGAGAC GCATGCGATC
ATCAAGCGTC TGCGCGTCGA GCTCGACAAC TATGCCAAGG ACAAGCTGCT GCTGGCGGAA
GCCAATCAAT GGCCGGAGGA TGTGCAGGAA TATTTCGGCC AGGGCGACGA ATGCCACATG
GCCTACCACT TCCCGCTGAT GCCGCGCATC TACATGGCCA TCGCGCAGGA GGACCGCTTC
CCGATCACCG ACATCCTGCG CCAGACGCCG GATATTCCCG CGACCTGCCA ATGGGCGCTG
TTCCTGCGCA ACCATGACGA ACTGACCTTG GAAATGGTCA CCGACGTCGA GCGCGATTAT
CTGTGGTCGA CCTATGCCAA CGATCCGCGC GCGCGCATCA ATGTCGGCAT CCGCCGGCGC
CTCGCGCCGC TGATGGACAA TGACCGGCGC AAGATCGAGC TGATGAACTC GCTGCTGATG
TCGTTCCCGG GCACGCCGAT CATCTATTAC GGCGACGAGA TCGGCATGGG CGACAACATC
TATCTCGGCG ACCGCAACGG CGTGCGCACG CCGATGCAGT GGACGCCGGA CCGCAATGGC
GGCTTCTCGC GCGCCGACCC GGCCCGGCTG TATGCGCCGA TGATCATGGA TCCGGTCTAC
GGCTACGAGG CCGTCAATGT CGAGGCGCAG TCGCGCAGCC TGTCGTCGCT GTTGAATGCG
ACCAAGAAGC TGATCTCGGT GCGCAAATCG ACGCCCGCCT TTGGCCGCGG CACCATGAGC
TTCATCCGCC CGGCCAACCG CTCCGTGCTG GCCTATGTCC GGCAATACAA GGACGAAGTC
ATTCTCTGCG TCGCCAATCT GTCGCGGTCG GCGCAGGCGA CGGAGCTCGA CCTCTCGGCC
TTCAAGGACC GCGTGCCGAT CGAAATGCTG GGCCGGTCGC GCTTTCCCGC GATCGGCGAG
CTGCCTTATA TGATCACGCT GGCGCCGTAC GGATTCTACT GGTTTCAACT GCGCGAGCGG
GAGAAGTCCG AACCGGTGGT CCAGCGCGCC GTGCCGGAGT TCGAGACGCT GGTGGTTCCC
GTCGGGTCGA CCTGGGTTTC GCTGGCGCGC ACGCGGAGCC TGTTCGAACG CGACGTGCTG
CCCGGACATC TGGCGCGCAC GCGTTGGTAT CCGGAACGGT CGGCCGATGC GATCCACCCG
ACGCTGACAT CCGCCATTCC GTTCTGTGAC ATCGGCGACA ACCGCCCCTG GCTGATCTTC
TTCAAGGCCG CTGAACGCAA CGACGAGCTG CGCTATCTGC TGCCGATGTG GATCGACTGG
GTTCGCTTCG ATCGCGAGCG CTACAATCCG CAGGCGTTTG CCGCCGTGCG CCAGGGCGCG
CGTGAAGGCA CCGTACTGGA TGCCGCGACC AGCCCGATCT TTCTCGCTCT GCTGCTGCGC
AATCTCCGGC AGTCGCTGAC CGTGGAGGAA GACGGGCTGC GCCTCGAATT TCGTCCGACC
TCGAAATTTC CCGACCGGCC GATCAGCGAG TCCGAGCAGG TTCGCATCAT CGAGACCGAC
CGCTGCAGCA GCAAGGCCGT CGTCAACAAC GACTACTTCA TCAAGATCCA CCGTGAACTC
GAGGCAGGCG TTCACCCCGA GATCGACGTC GGCCATTTCC TGACCGAGAC TGTCGGCTTC
GCCAACGTGC CGCCATTGCT CGGCAGCGTC GAGTTCATCC AGGACGACGA GCGCCGCACG
ATCGGCAGTG TTCATGGCTT CATCGAGAAC CAGGGCGACG GCTGGACCGT CACCTTGGCC
TATCTCGATC GCTACATCGA CGACCAGCGG GTGTTCACCG CCCAAGGCGA CGAGCGGCAG
AACGAGGAGC GCTCCCCCTA TCTGCGCTAT ATGACTCAGG CGGGCCGACG GGTCGGCGAG
TTGCATGCGG CCCTGGCATC CCGCAACGAC ATCGCCGATT TTGCCCCCGA GCCGACCACA
GCCGACAGCC TCGATCATTG GATCGACCGG CTTCGCGCCC AGGCCAACCG GGTCCTTGCC
CGACTGATCG AGCGGCGCGA CCACTTCAAG GACCCGGAAC GCGGCCTCAT CGATCAGGTG
CTCGCCAGGC GCGGCGAATT GTCCGAGCGG CTGAGCCATC TGATCCCGCA CCACGTCGGC
GGCTGCGATA TCCGCCTGCA TGGCGATTTT CATCTCGGCC AGATCCTGAT CGTCAAGGAT
GACATCTTCA TCATTGATTT CGATGGCGAC GAGGAGCAGC CGCTGGCCGA GCGTCGCCGC
AAGGCGCCGC CGGCGAAAGA TATCGCAGGC TTCCTGCGCT CGATCGACTG CTCGGTCCGT
GTTGCGCTCG ATCACGCCCT GCAGGCCGCC CCCGACGATC ACAGCAAGCT GACCACGGCC
TTGGCGGACT GGCGCGACCA GGCCAGCGCC GCGTTCTTGG CAGGTTATCG GGAGATCAAG
GCCGCCCAGG GCCTTTGGCC TGACGATCCG CACACAGCAG AGGCGCTCCT GAGCTTTTTC
CTGCTGGAAA AAGCGCTCGG CGCACTGGAA TATGACCTCG CTCACCGGCC GGACTGGCTA
CGCGTCGCGC TGGGCAACCT GCTTCGCGTC CTGTCCGTAC CAGCACCTGC CAGCGAGTCC
TCATGA
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| Protein sequence | MNLMSSLDAP NLQTATDGDG LWYKDAIIYQ LHVKAFADSN NDGIGDFVGL TEKLDYLQDL
GVTALWLLPF YPSPGRDDGY DIADYGSINP DFGTMKDFKR FIQEAQRRGL RVITELVVNH
TSDQHHWFKR ARRSPPGSSA RNWYVWSDTD QKYLGTRIIF TDTEKSNWTW DPEAGQFYWH
RFFSHQPDLN FDNPRVVSAI IQVMKRWLDA GVDGFRLDAI PYLCERDGTN NENLPETHAI
IKRLRVELDN YAKDKLLLAE ANQWPEDVQE YFGQGDECHM AYHFPLMPRI YMAIAQEDRF
PITDILRQTP DIPATCQWAL FLRNHDELTL EMVTDVERDY LWSTYANDPR ARINVGIRRR
LAPLMDNDRR KIELMNSLLM SFPGTPIIYY GDEIGMGDNI YLGDRNGVRT PMQWTPDRNG
GFSRADPARL YAPMIMDPVY GYEAVNVEAQ SRSLSSLLNA TKKLISVRKS TPAFGRGTMS
FIRPANRSVL AYVRQYKDEV ILCVANLSRS AQATELDLSA FKDRVPIEML GRSRFPAIGE
LPYMITLAPY GFYWFQLRER EKSEPVVQRA VPEFETLVVP VGSTWVSLAR TRSLFERDVL
PGHLARTRWY PERSADAIHP TLTSAIPFCD IGDNRPWLIF FKAAERNDEL RYLLPMWIDW
VRFDRERYNP QAFAAVRQGA REGTVLDAAT SPIFLALLLR NLRQSLTVEE DGLRLEFRPT
SKFPDRPISE SEQVRIIETD RCSSKAVVNN DYFIKIHREL EAGVHPEIDV GHFLTETVGF
ANVPPLLGSV EFIQDDERRT IGSVHGFIEN QGDGWTVTLA YLDRYIDDQR VFTAQGDERQ
NEERSPYLRY MTQAGRRVGE LHAALASRND IADFAPEPTT ADSLDHWIDR LRAQANRVLA
RLIERRDHFK DPERGLIDQV LARRGELSER LSHLIPHHVG GCDIRLHGDF HLGQILIVKD
DIFIIDFDGD EEQPLAERRR KAPPAKDIAG FLRSIDCSVR VALDHALQAA PDDHSKLTTA
LADWRDQASA AFLAGYREIK AAQGLWPDDP HTAEALLSFF LLEKALGALE YDLAHRPDWL
RVALGNLLRV LSVPAPASES S
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