| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6304 |
|---|
| Symbol | pqqE |
|---|
| ID | 5151992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6549250 |
|---|
| End bp | 6550446 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640561011 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
|---|
| Protein accession | YP_001242128 |
|---|
| Protein GI | 148257543 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC TGACTGAGAC GACGCCGCAG GTCGACGCGA ATGACGGGCT CGCCGTGCTG
GAGCGGCGCG GTTCCGTGGC CGAGACTTAC GGCATTCCGC TCGCCGTGCT GCTCGAACTC
ACGCATCGCT GCCCGCTGCA ATGCCCCTAT TGCTCCAACC CGTTGGAGCT CGATCGCGCC
GGCCAGGAGC TGACCACCGC CGAATGGAAG AAGGTGCTGT CGGAGCTCGC CGAGATCGGC
GTGCTGCAGG TGCATTTCTC GGGCGGCGAG CCGACCGCGC GCAAGGACAT CGTCGAGCTG
GTGCAGCACG CCAATGACGT CGGGCTCTAC ACCAATCTGA TCACCTCGGC GGTGCTGCTG
ACGCGCGAGC GGCTGAAGGA GCTGGCAGAT GCCGGGCTGT GTCACGTGCA GATCAGCTTC
CAGGGCAACG AGCCCGTCGT GGCCGATCGC GTCGGCGGCT ACAAGGGCGG CCATGCCAAG
AAGCTCGAGG TCGCGAAGTG GACCCGCGAG CTGGACCTGC CGCTGACGGT GAACGCTGTG
ATGCACCGGC AGAACCTGCA CCAGCTGCCG GACATCATCC AGATGGCGGT CGATCTCGAT
GCCGACCGGC TCGAGGTCGC CAATGTGCAA TATTACGGCT GGGCGCTGAA GAACCGCGCC
AGCCTGATGC CGACTTACGA ACAGTTGGAG GAAACCGACC GCCTGGTCGA AGAGGCGCGC
GAGCGGCTGA AAGGCACGCT GACCATCGAC TACGTCGTGC CGGACTACTA CGCACTGCGG
CCGAAGAAGT GCATGGGCGG CTGGGGCCGG CAGTTCTTCA ACATCTCGCC GTCGGGCAAG
GTGCTGCCGT GCCATGCTGC CGAGAGCATC ACCGGGCTCG ACTTCATGTC GGTGCGCTCG
AACAACTCGA TCGCCTGGAT CTGGCAGAAC TCCGAGGCCT TCAACCGCTA TCGCGGCACC
GGCTGGATGA AGGAGCCGTG CAAATCTTGC GAGTTCCGCG AGATCGATTT CGGCGGCTGC
CGCTGCCAGG CCTTCGCACT GACCGGCGAT GCGGCCAACA CGGATCCGGC CTGCACGCTG
TCGCCGCTGC ACGAGAGCAT CTTCAAGCAG GCCGAGCGCG ACGCGGCCTC GGGCCAGGAC
CGCTTCCTCT ATCGCAACTT TGCCGGCGGC ACGCCGGAGA ACGGCAACGA TGCCTGA
|
|---|
| Protein sequence | MTELTETTPQ VDANDGLAVL ERRGSVAETY GIPLAVLLEL THRCPLQCPY CSNPLELDRA
GQELTTAEWK KVLSELAEIG VLQVHFSGGE PTARKDIVEL VQHANDVGLY TNLITSAVLL
TRERLKELAD AGLCHVQISF QGNEPVVADR VGGYKGGHAK KLEVAKWTRE LDLPLTVNAV
MHRQNLHQLP DIIQMAVDLD ADRLEVANVQ YYGWALKNRA SLMPTYEQLE ETDRLVEEAR
ERLKGTLTID YVVPDYYALR PKKCMGGWGR QFFNISPSGK VLPCHAAESI TGLDFMSVRS
NNSIAWIWQN SEAFNRYRGT GWMKEPCKSC EFREIDFGGC RCQAFALTGD AANTDPACTL
SPLHESIFKQ AERDAASGQD RFLYRNFAGG TPENGNDA
|
|---|
| |