| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6303 |
|---|
| Symbol | pqqD |
|---|
| ID | 5152485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6548945 |
|---|
| End bp | 6549253 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640561010 |
|---|
| Product | coenzyme PQQ synthesis protein D |
|---|
| Protein accession | YP_001242127 |
|---|
| Protein GI | 148257542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCGC GTCACATCCA AGTTGCCGAG ACCAGCCGCG TGGTACTGCC GCGGCATACC
AAGCTGAAAT TCGACGAGAC GCGCCAGGTC TGGGTGATCC TGGCGCCGGA GCGGGTGCTG
GCGCCGGATG AGATCGCGGT CGAGGTGCTC AAACTGTGCG ACGGCGTGCG CAGCGTTGCC
GGCATCATCG ACGAGCTGGC GACGAAATAT GCCGCGCCGC GCGACGTGAT CGCGACCGAC
GTCGTGGCCA TGCTACAGGA TCTCGCCGAC AAGGGCTTTC TGACCGAGGT TCGGGAGACG
ACCTCATGA
|
|---|
| Protein sequence | MAPRHIQVAE TSRVVLPRHT KLKFDETRQV WVILAPERVL APDEIAVEVL KLCDGVRSVA
GIIDELATKY AAPRDVIATD VVAMLQDLAD KGFLTEVRET TS
|
|---|
| |