| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6301 |
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| Symbol | pqqB |
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| ID | 5152483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6546994 |
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| End bp | 6547923 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561008 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_001242125 |
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| Protein GI | 148257540 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.587139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCGCC TCGTCGTCCT GGGCGCCGCC GCGGGCGGCG GAGTCCCGCA ATGGAATTGT
GGCTGCGCGG TGTGCCGTGC CGCGCGCACC TCACATCCCG AGATCCGCAA CAGCCAGGCG
TCAGTCGCCG TCAGCGCCGA TGGCGCCAAC TGGTTCCTGA TCAACGCCTC GCCCGACCTG
CGCCAGCAGG TCACCTCGAC GCCGCAGCTG CATCCGAAGC CGGGCGCGCT GCGCCACAGC
CCGATCGCCG GCGTGATCCT GACCAATGGC GAGATCGACG CGATCACCGG GCTGCTGTCG
ATGCGCGAAA GCTCACCTTT CTCGATCCAT GCGCACCCCA AGGTGCTTGC GATCCTGCGT
TCGAACAACA TCTTCGATGT GCTGAAGGAC GAGACGGTCA AGCGCGTTCC GATCGTCATC
GATGTTCCGT TCCGGCCGCT GCTGCAGGAC GGCGCGCCGT CCGGCCTCGA GGTCACCGCC
TTCGCGGTGT CCGGCACCAG CGCCTGGTAT CTGCGTGACA AGCAGCACCC GGGCGGCAGC
GCATCGGCCG GCGACACGCT GGGGCTGAGG ATCGCCGACC TCGACAGCGG GCAATATTGC
TACGTCATTG CCGCCTGCGC CGACGTCGAC CATGAGCTGA GAATGAAATT GAAGGGCGCG
CCGCTGGTGC TGTTCGATGG CACGGTGTGG CGCGACGACG AGATGATCCA GGCCGGACTC
GGCAACAAGA CCGGGCAGAG CATGGGACAT ATCGCGATGT CCGGAGAAAG CGGCGCGATC
AAGCAGCTGG CGGACCTCGG GATCGGCAGG AAGATCTTCC TGCACATCAA CAACTCCAAT
CCGGCGTGGC TGCACGCCTC ACCCGAGCGG CAAACGTTGG AACGCGAGGG ATGGGAAATC
CCCGCTGAAG GGATGGAGAT CGTATTGTGA
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| Protein sequence | MLRLVVLGAA AGGGVPQWNC GCAVCRAART SHPEIRNSQA SVAVSADGAN WFLINASPDL
RQQVTSTPQL HPKPGALRHS PIAGVILTNG EIDAITGLLS MRESSPFSIH AHPKVLAILR
SNNIFDVLKD ETVKRVPIVI DVPFRPLLQD GAPSGLEVTA FAVSGTSAWY LRDKQHPGGS
ASAGDTLGLR IADLDSGQYC YVIAACADVD HELRMKLKGA PLVLFDGTVW RDDEMIQAGL
GNKTGQSMGH IAMSGESGAI KQLADLGIGR KIFLHINNSN PAWLHASPER QTLEREGWEI
PAEGMEIVL
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