| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6287 |
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| Symbol | |
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| ID | 5150947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6534019 |
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| End bp | 6535212 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560995 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_001242112 |
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| Protein GI | 148257527 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.53503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACC CCCGCCGCGT GATCGGCTTC GTCAACGCCG CCCATTTCGT CGACCATTAC
GCGATGCTGA TCTTCGCGGC TGCAGTCATC ATCATGGGGC CGGCGCTCGG CATGGCCTAT
GCGGAGCTGC TGCCCTATGC GACGCCCGGC TTTGTCGCCT TCGGCGCCGG CGCGCTTCTC
ACCGGCTGGC TCGGCGACCG CTGGAGCCGG CGGCACATGA TGCTGATCTT CTATCTCGGC
ATCGGCCTGT CGATGATCTC GGTCGGCCTG GTACAGACGC CCTGGCAGCT CGGCGCGGCG
CTGTTCGCCA TCGGCCTGTT CGCCTCGATC TATCATCCGG TGGGAACCGC GATGCTCGTC
TCGTATGCCG ACCGGCTCGG CCGCGACATG GGGCTGAACG GCGTTTTCGG CAATCTCGGC
GTGGCGTCGT CGGCGCTGGT CACGGGTGTC GTGGGGCAAT ATCTCGGCTG GCGCTTCGCG
TTCATCGTGC CCGGAGTCAT CACGGTCGGC CTCGGCATGG CCTTTGCGAT GCTGGTCGCG
CATGAGGACC GCAGGGGTTC GAAGCAGGCG GCGGCGCAGG CCCGCGTCGC GCGCGATCAG
ATGTGGCGCG TGGTGCTGGC GCTGTTGCTG GTGGTGGTGG CGATCTCCAC GACCTTCAAC
GCGATCACCG TGGCGCTGCC AAAGCTGTTT GCGGAACGGC TGGCTGGGCT GACGCAGAGC
CCGGCGCTGC TCGGATTGAT CGCGGCTTGC GTCTACGTGT TCGGCGCGCT GACGCAGTAT
ACGATCGGGC GATTGCTCGA TCGTCACACG TTGAAGGCTG TCGCGCTGCC GCTGTCGCTG
GTGCTGGCGC CGCTGCTGTA TCTCGCCGCC GATGCCCGCG ACTGGACGCT GATCCTGGCC
TCGATCGGTA TCGTGATGGG CGCGTTCGGC CAGGTCACCG TCAACGACGC GATGGTCGGC
AAATACACTG CGGAAGAGTG GCGTTCGCGC GCTTATGCTG TGCGCTATTT CGTCGGCTTC
ACCGCGGCCG GCGCCTCGGT CGGCCTGGTC GCCTGGCTGT ATGAGCGCGG CGGCTTCGTC
ACCATGCTGC AGGCCTTCGC CGCGCTGGCC CTGGTCGCGA TCGTCGCCGC CCTGATCCTG
CCGCCGGAGC TTCCGGCGGC GCAGCCGGCC TTGCGCGTGT CGCCGGCGGA ATGA
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| Protein sequence | MNNPRRVIGF VNAAHFVDHY AMLIFAAAVI IMGPALGMAY AELLPYATPG FVAFGAGALL
TGWLGDRWSR RHMMLIFYLG IGLSMISVGL VQTPWQLGAA LFAIGLFASI YHPVGTAMLV
SYADRLGRDM GLNGVFGNLG VASSALVTGV VGQYLGWRFA FIVPGVITVG LGMAFAMLVA
HEDRRGSKQA AAQARVARDQ MWRVVLALLL VVVAISTTFN AITVALPKLF AERLAGLTQS
PALLGLIAAC VYVFGALTQY TIGRLLDRHT LKAVALPLSL VLAPLLYLAA DARDWTLILA
SIGIVMGAFG QVTVNDAMVG KYTAEEWRSR AYAVRYFVGF TAAGASVGLV AWLYERGGFV
TMLQAFAALA LVAIVAALIL PPELPAAQPA LRVSPAE
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