| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6272 |
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| Symbol | |
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| ID | 5151159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6519290 |
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| End bp | 6520924 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640560980 |
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| Product | putative choline (or alcohol) dehydrogenase |
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| Protein accession | YP_001242097 |
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| Protein GI | 148257512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGT TCGACTATGT GATCGTGGGC GCCGGCTCGG CCGGCTGCGT GCTGGCCAGC
CGCCTCAGCG AGGACCCGTC GGTCACGGTA TGCGTGCTGG AGGCGGGGCC GCGCGACTGG
CACCCCTACA TCCATCTGCC GGCCGGCTTC ATCAAGACCT TCTACATGAA GAGCATCAAT
TGGGGCTACC AGCAGGAGCC GGGGCCCTAC ACCAATGGCC GCAGCATCTA TGCGCCGCGC
GGCAAGACGC TCGGCGGCTC GTCCTCGATC AACGGCCATG TCTACAACCG CGGCCAGCGT
CAGGATTTCG ACACCTGGGC GCAGATGGGC AATCGCGGCT GGAGCTATTC CGACGTGCTG
TCGCACTTCA AGCGGATGGA GAAGCGCATC GGCGCCGGCG ACGAGCAATA TCGCGGCCGC
GACGGCAGCC TGCACGTGAC CACGATGGAG TGGAAGGACA CGCTGTGCGA GGCCTTCATG
GATGGCGCTG TGTCGCTCGG CATCCCGCGC AACCCCGATT ATAACGGCGC CATCCAGGAG
GGCGTGTCCT ACGTCCAGCG CACCATCCAG AACGGCCGCC GCGTCTCCTC CGCGACGGCG
TTCCTGCGTC CGGCCAGCAA GCGGCCGAAT GTCGAGATCC GCACCCACGC CCATGCCACC
GGCGTGATGC TCGAGGGCAA GCGCGCGGTC GGTGTGCGCT ATAGCCGCGG CGGGCGTGGC
GGCGTGCCGG TCGAGGTGCG CGCGCGGAAA GAGGTGATCC TGTGCGGCGG CGCCTACAAC
TCACCGCAGT TGCTGCAGCT GTCCGGCATC GGCGCGCCGG AGCTGTTGCA GGAGCACGGC
ATCGAGGTGC GCCATGCGCT CCGAAGCGTC GGTGAAGGCC TGCAGGATCA TTATGCGCCG
CGCACGGTCG CGCGGGTCAA GAACATCAAG ACCATCAACG AACTCGCGCG CGGCCTCAAT
TTGTGGGGCG AGGCGCTGAA ATGGGCGCTG ACGCGGCGGG GCATTCTGTC GCTGTCGCCG
ACCATGGTCT ATTGCTTCTG GCACTCCGGT GAGACCGCCG AGAGCTCCGA TCTGCAGCTC
ACCTTCACGC CGGCGAGCTA CAAAGAGGGC GTGCAGGGCC AGCTCGAGGA CGAGCCCGGC
ATGACCGTCG CCTCGTGGCA GCAGCGCCCG GAGAGCCGCG GCTATGTGCG GATCCGCTCT
GCCGATCCGT TCGCCCAGCC GATCATCCAG ACCAACTATC TGACCGCCGA GCTCGACCGC
CGCGTCATCG TCGCCGGCAT GAAGCTGGCG CGCCGGCTGC TGGCGTCGGC CCCGCTCGCG
CCGTACTACG CCTATGAGGA CTTCCCCGGA CCCAAGGTGC AAAGCGACGA CGAACTCCTC
GCCGCCGCGA TCCAGCGCGC CACCACCACT TTCCATCCCG GCTGCTCCTG CCGCATGGGG
CCTGCGGAGT CCACCTGGGC CACGGTCGAC GACCAGCTCC GCGTCCACGG CCTGCAGGGC
CTGCGCGTCG CCGACGCCTC CATCATGCCG CGCATGATCT CCGCCAACCT GAATGCGGCG
ACATTGATGA TCGGCGACAA GGCGGCGGAT CTGATCCTGG GCAAGGCCGA CGCGGGGGAG
AGGCTGTCGG CGTAG
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| Protein sequence | MDTFDYVIVG AGSAGCVLAS RLSEDPSVTV CVLEAGPRDW HPYIHLPAGF IKTFYMKSIN
WGYQQEPGPY TNGRSIYAPR GKTLGGSSSI NGHVYNRGQR QDFDTWAQMG NRGWSYSDVL
SHFKRMEKRI GAGDEQYRGR DGSLHVTTME WKDTLCEAFM DGAVSLGIPR NPDYNGAIQE
GVSYVQRTIQ NGRRVSSATA FLRPASKRPN VEIRTHAHAT GVMLEGKRAV GVRYSRGGRG
GVPVEVRARK EVILCGGAYN SPQLLQLSGI GAPELLQEHG IEVRHALRSV GEGLQDHYAP
RTVARVKNIK TINELARGLN LWGEALKWAL TRRGILSLSP TMVYCFWHSG ETAESSDLQL
TFTPASYKEG VQGQLEDEPG MTVASWQQRP ESRGYVRIRS ADPFAQPIIQ TNYLTAELDR
RVIVAGMKLA RRLLASAPLA PYYAYEDFPG PKVQSDDELL AAAIQRATTT FHPGCSCRMG
PAESTWATVD DQLRVHGLQG LRVADASIMP RMISANLNAA TLMIGDKAAD LILGKADAGE
RLSA
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