| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6264 |
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| Symbol | plcN |
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| ID | 5150937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6507821 |
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| End bp | 6509950 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640560973 |
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| Product | non-hemolytic phospholipase C precursor |
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| Protein accession | YP_001242090 |
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| Protein GI | 148257505 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.339495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.82782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACA CGATCGCGCA TAACCGGCGC GAGTTCTTGC GGCTGCTGGG TGCGTCGGCC
GCCACTGCGG CGCTCAGCCA GAGCATCGAG CGGGCCCATG CCATTCCGGC CTTCAATCGC
CATGGCAGCA TCGAGGACGT CAAGCACATC GTGGTGCTGA TGCAGGAGAA CCGCGCGTTC
GACCATTATT TCGGCGCGAT GCGTGGCGTG CGTGGCTTCA ACGATCCGCG CGCCGTCAAG
CTGCCGAATG GCAATCCGGT CTGGCAGCAG CCGAACGGCA CCGGATCGGT CATGCCGTTC
CGGGTCGACA ATGCCGGTTC GGTCTATGTC GAGGACGTCG CCCATGGCTG GAACGACGGC
CAGAAGGCCT GGAACAACGG CAATTACGAC AAGTGGATCG CCAATAAGGG CACCACGACG
ATGACCTGCA TGAACCGGCA GGATCTGCCC TGGCACTACG CACTCGCCGA CGCATTCACG
ATCTGCGATC AGTATTTCTG CTCGGTGATG GGACCGACCG ATCCGAACCG CTATTATTTG
TGGACCGGCT GGGACGGCAA TGACGGCAAG AATGGCGGTC CGGTCATCAC CAATGCCGAG
GCGGGTTACG ACTGGACCAC GTTCCCGGAG CGGCTCGAGA AGGCCGGCAT CTCCTGGAAG
GTCTATCAGG ACATCGGCAC GGGGCTGGAT GCCGCCGGCT CCTGGGGCTG GACGGCGAAT
CCGTGGATCG GCAATTACGG CGACAATTCG CTGCTGTACT TCCACCAATA TCAGAACGCG
CAGCCGGGCA GCCCGCTGTA TGAGAAGGCG CTGCGTGGCA GCAACATCGC CAAGGGCGGC
ACGTTCGAGA ATCTGTTCGA CGGGCTGCGC AACGATGTGC GCAACGGCAC GCTGCCGCAG
GTGTCGTGGA TCGCAGCCCC CGAGGCGTTC AGCGAGCATC CGAACTGGCT GCCGGGGCCG
GGCGCCTGGT ACATTTCCAA GGTGCTGGAC ATCCTGACCT CGAATCCGGA GCTGTGGAGC
AAGACCGTGC TGCTCATCAA CTACGATGAG GGCGGCGGCT TCTTCGATCA CGTCGTCGGT
CCGTATCCGG CGATGTCGCA GGCCTGGGGA CAGTCGACCG TCGACGTCAG CACCGATCTG
TTCGCCGGTG ACGGCAGTCA TGTCGCGGGT CCCTACGGCC TGGGCGTGCG TGTGCCGATG
ATGGTGGTGT CGCCGTGGTC GCGCGGTGGC TATGTGTGCT CGCAGGTGTT CGACCACACC
TCGGTGATCC GCTTCATCGA GCGCCGCTTC CATCACAAGG CGCGCGATCT GTTCGAGACC
AACATCCCGG CGTGGCGCCG CGCCGTCTGC GGCGATCTCA CCTCGGCATT CAACTTCACC
TCGCCGAACG AGGGCCTCGC GCCGCTGCCG AGCACGGCCG GCTACAAGCC GCCGGTGGCC
GACATCACCT CGGGCACCCG CTTCGACGAC TATCACCCGG TGCCGCCGGC CAAGCAGGCG
CTGCCGCAGC AGGAGCCGGG CATTCGCCCG GCGCGCCCAC TGCCTTACGA TCTCCGTGTC
GACGGCGATG CCGACGCGGC GCAGAAGAAG TTCGGAATCC GCTTCGTCAA TCCGGGGCAG
GCGGGCGTCT GCTTCCAGGT CCGCTCCGGC AACACCGCGA CCGGTCCGTG GAGCTACACG
GTCGAGGCCG GCAAGTCGCT GTATGGCGTC TGGGACCTCG CGGCGAGCGC CGGACAGTAT
GACCTGTCGG TGTACGGGCC GAACGGCTTC TTCCGCCACT TCAAGGGCGG TGTTGCCAGC
ACGGCCGCGC TGGTTGATGT CGACACCGTT CATCTCTGCG ATTGGGAGTA TGGTGACGGC
GCCCGCAGCC TGGCGATCGC GCTGACCAAC AAGGGCGCGA GCTGCGTGGT GACGCTGACC
GACAATTACA CCGGACGCAG CGAACGGCAC CGCCTGCAGC GTGGCCAGCG GCTGGAGACG
CAGATCGGTC TGCACCAGAC CCATGGCTGG TATGACCTTG CGGTGACCAC CGACAGCGAT
GCCAACTTCA ACTGGCAGCT CGCGGGTCAC GTCGAGAATG GCCGCCCGAG CATCAGCGAT
CCGGCGATGG GCCGGATCGC CGCGACCTGA
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| Protein sequence | MSNTIAHNRR EFLRLLGASA ATAALSQSIE RAHAIPAFNR HGSIEDVKHI VVLMQENRAF
DHYFGAMRGV RGFNDPRAVK LPNGNPVWQQ PNGTGSVMPF RVDNAGSVYV EDVAHGWNDG
QKAWNNGNYD KWIANKGTTT MTCMNRQDLP WHYALADAFT ICDQYFCSVM GPTDPNRYYL
WTGWDGNDGK NGGPVITNAE AGYDWTTFPE RLEKAGISWK VYQDIGTGLD AAGSWGWTAN
PWIGNYGDNS LLYFHQYQNA QPGSPLYEKA LRGSNIAKGG TFENLFDGLR NDVRNGTLPQ
VSWIAAPEAF SEHPNWLPGP GAWYISKVLD ILTSNPELWS KTVLLINYDE GGGFFDHVVG
PYPAMSQAWG QSTVDVSTDL FAGDGSHVAG PYGLGVRVPM MVVSPWSRGG YVCSQVFDHT
SVIRFIERRF HHKARDLFET NIPAWRRAVC GDLTSAFNFT SPNEGLAPLP STAGYKPPVA
DITSGTRFDD YHPVPPAKQA LPQQEPGIRP ARPLPYDLRV DGDADAAQKK FGIRFVNPGQ
AGVCFQVRSG NTATGPWSYT VEAGKSLYGV WDLAASAGQY DLSVYGPNGF FRHFKGGVAS
TAALVDVDTV HLCDWEYGDG ARSLAIALTN KGASCVVTLT DNYTGRSERH RLQRGQRLET
QIGLHQTHGW YDLAVTTDSD ANFNWQLAGH VENGRPSISD PAMGRIAAT
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