| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6253 |
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| Symbol | |
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| ID | 5150640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6494304 |
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| End bp | 6495266 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560962 |
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| Product | putative phosphoglycerate dehydrogenase (PGDH), serA-like protein |
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| Protein accession | YP_001242079 |
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| Protein GI | 148257494 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.235153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGGC TGCGCTGTGC AATTCTCGAC GACTATTACG ACAAGGCTCT CGCGCTGGCG
GATTGGCGCC GGCTCGCCGA CAAAGTGGAC GTGACGGCCT TCACACATCC CTTCGGCAGC
GAGGATGCCG CCGCCGGCGC GCTCGCAGAC ATCGAGATCG TCTGCGCGAT GCGTGAACGA
ACGCCGTTCC CGCGCGCGCT GATCGAACGC CTGCCGAAGC TGAAGCTCCT GATCACCTCG
GGCATGCGCA ATGCCGCCAT CGACATGGAC GCCGCCAAGG GCCGCAGCAT CGTGGTCTGC
GGCACCCAAT ATGGCCGCGA CCCCACCGCG CCGCTGACGA TGGGCCTGAT CCTGGAACTG
ACCCGCAAGA TCGGCCAGGA AAACGCGCGC ATGCATGCTG GCGCAGCTTG GCAGGCGCTC
GGCGGCGTCG AGATTGAGGG CAAGACGCTC GGGATCGTCG GACTTGGCAA GCTCGGCAGC
AAGGTCGCGG GGCTCGCCAA GGCGTTCGGC ATGAACGTGA TGGCATGGAG CCCGAACCTG
ACGCCCGAAC GCTGCCAGGA GGCCGGCGTC GGCTACGCCA CGAAGGAGGC GTTGTTCGCA
ACCGCCGACA TCATCACCAT CCACGTCGTG CTCAGCGACC GCTCCCGCGG ACTGGTCGGC
GCAGCGGACA TCGCCCGGAT GAAACCGAGT GCCTATCTCG TCAACACGTC GCGCGCGCCG
ATCGTGGACG AGGCGGCCCT GCTCCAGGCC CTGCGTGACA AGCGCATCGC GGGTGCAGCG
CTCGACGTAT TCACGGTGGA ACCGCTTCCG GTGCCGCACC CGCTGCGCGG GCTCGACAAC
GTCGTGCTCA CGCCGCATCT CGGCTATGTC ACGGAAGAGA GCTTTCGGGC TCATTACAGC
CAGATGGTTG AATGCATCGC CGCCTGGCTC GGCGGGGCCG AGCCGCCGCG CCGGCTCGCC
TGA
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| Protein sequence | MTRLRCAILD DYYDKALALA DWRRLADKVD VTAFTHPFGS EDAAAGALAD IEIVCAMRER
TPFPRALIER LPKLKLLITS GMRNAAIDMD AAKGRSIVVC GTQYGRDPTA PLTMGLILEL
TRKIGQENAR MHAGAAWQAL GGVEIEGKTL GIVGLGKLGS KVAGLAKAFG MNVMAWSPNL
TPERCQEAGV GYATKEALFA TADIITIHVV LSDRSRGLVG AADIARMKPS AYLVNTSRAP
IVDEAALLQA LRDKRIAGAA LDVFTVEPLP VPHPLRGLDN VVLTPHLGYV TEESFRAHYS
QMVECIAAWL GGAEPPRRLA
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