Gene BBta_6251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6251 
Symbol 
ID5150638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6492015 
End bp6493664 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content64% 
IMG OID640560960 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001242077 
Protein GI148257492 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.223769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCC AGTTCGTCTA CTTCATGCAG GGTCTGTCCA AGACCTACCC GACCCGCAAG 
GTGCTCGATA ACATCCATCT GTCCTTCTAT CCCGACGCCA AGATCGGCGT GCTCGGTGTC
AACGGCTCGG GTAAGTCGAC CCTGCTCAAG ATCATGGCAG GGATCGACAA GGAGTACACC
GGCGAGGCCT GGGTCGCCGA AGGCGCCCGC GTCGGCTATC TTGAGCAGGA GCCGCAGCTC
GATCCCAAGC TCTCGGTGCG CGAGAACGTC ATGCAGGGCG TCGCCAAGCA GAAGGCGATC
CTCGATCGCT ACAACGAGCT GGCGATGAAC TATTCCGAGG AAACCGCCGA CGAAATGACC
AAGCTGCAGG ACGAGATCGA GGCCCAGGGC CTGTGGGATC TCGACAGCAA GGTCGACCAG
GCGATGGACG CGCTGCGCTG TCCGGCCGAC GACGCCGATG TCAGCAAGCT CTCCGGCGGT
GAGCGCCGCC GCGTCGCGCT GTGCCGGCTG CTGCTCGATC AGCCCGAGCT GCTGCTGCTC
GACGAGCCGA CCAACCATCT TGACGCCGAA TCGGTGTCCT GGCTGGAAGG CCACCTGCGC
AACTATCCCG GCGCGATCCT GATCGTCACC CACGACCGCT ACTTCCTCGA CAACGTCACC
AGCTGGATCC TCGAGCTCGA TCGCGGCAAG GGCATTCCCT ACGAGGGCAA CTACTCGTCC
TGGCTACAGC AGAAGCAGAA ACGGCTGGAG CAGGAGGGGC GCGAGGAGGC GGCGCATCAG
CGCACCCTGG CCCGCGAGCA GGAGTGGATC GCGGCCTCGC CGAAGGCCCG CCAGGCCAAG
TCCAAGGCGC GCTACCAGCG CTACGAAGAG CTGCTCAAGA AGGCCAGCGA GAAGCAGACC
CAGACCGCGC AGATCATCAT TCCCGTGGCT GAGCGCCTCG GCAACAACGT CATCGATTTC
GAAGGCCTGA CCAAGAGCTT CGGGGATCGC CTGCTGATCG ACAATCTCAC CTTCAAGCTG
CCGCCGGGCG GCATCGTCGG TGTCATCGGC CCGAACGGTG CCGGCAAGAC CACGCTGTTC
CGCATGATCA CCGGGCAGGA GAAGCCGGAC GCCGGCACCA TTACCGTCGG CGAGACCGTG
CATCTCGGCT ATGTCGACCA GTCGCGCGAT GCGCTCGACG GCAACAAGAC GGTGTGGGAG
GAGATCTCCG GCGGCAACGA GCTGATCCTG CTCGGCAAGA AGGAAGTGAA CTCGCGCGGC
TATTGCTCGT CCTTCAACTT CAAGGGCGCC GACCAGCAGA AGAAGGTCGG CGCGCTCTCC
GGCGGTGAGC GCAATCGCGT GCATCTCGCG AAGATGCTGA AGTCGGGCGC CAACGTCCTG
CTGCTCGACG AGCCGACCAA CGATCTCGAT GTCGACACCT TGCGCGCGCT CGAAGAGGCG
CTGGAGGATT TCGCCGGCTG CGCCGTCATC ATCAGCCACG ATCGCTGGTT CCTCGACCGT
ATCGCGACCC ACATGCTGGC CTTCGAGGGC GACAGCCATG TCGAATGGTT CGAAGGCAAC
TTCCAGGACT ATGAGAAGGA CAAGATGCGC CGACTCGGCC AGGACAGCGT CATCCCGCAC
CGGGTCAAGT ACAAGAAGCT GACGCGCTGA
 
Protein sequence
MARQFVYFMQ GLSKTYPTRK VLDNIHLSFY PDAKIGVLGV NGSGKSTLLK IMAGIDKEYT 
GEAWVAEGAR VGYLEQEPQL DPKLSVRENV MQGVAKQKAI LDRYNELAMN YSEETADEMT
KLQDEIEAQG LWDLDSKVDQ AMDALRCPAD DADVSKLSGG ERRRVALCRL LLDQPELLLL
DEPTNHLDAE SVSWLEGHLR NYPGAILIVT HDRYFLDNVT SWILELDRGK GIPYEGNYSS
WLQQKQKRLE QEGREEAAHQ RTLAREQEWI AASPKARQAK SKARYQRYEE LLKKASEKQT
QTAQIIIPVA ERLGNNVIDF EGLTKSFGDR LLIDNLTFKL PPGGIVGVIG PNGAGKTTLF
RMITGQEKPD AGTITVGETV HLGYVDQSRD ALDGNKTVWE EISGGNELIL LGKKEVNSRG
YCSSFNFKGA DQQKKVGALS GGERNRVHLA KMLKSGANVL LLDEPTNDLD VDTLRALEEA
LEDFAGCAVI ISHDRWFLDR IATHMLAFEG DSHVEWFEGN FQDYEKDKMR RLGQDSVIPH
RVKYKKLTR