Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6251 |
Symbol | |
ID | 5150638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6492015 |
End bp | 6493664 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560960 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001242077 |
Protein GI | 148257492 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.223769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCC AGTTCGTCTA CTTCATGCAG GGTCTGTCCA AGACCTACCC GACCCGCAAG GTGCTCGATA ACATCCATCT GTCCTTCTAT CCCGACGCCA AGATCGGCGT GCTCGGTGTC AACGGCTCGG GTAAGTCGAC CCTGCTCAAG ATCATGGCAG GGATCGACAA GGAGTACACC GGCGAGGCCT GGGTCGCCGA AGGCGCCCGC GTCGGCTATC TTGAGCAGGA GCCGCAGCTC GATCCCAAGC TCTCGGTGCG CGAGAACGTC ATGCAGGGCG TCGCCAAGCA GAAGGCGATC CTCGATCGCT ACAACGAGCT GGCGATGAAC TATTCCGAGG AAACCGCCGA CGAAATGACC AAGCTGCAGG ACGAGATCGA GGCCCAGGGC CTGTGGGATC TCGACAGCAA GGTCGACCAG GCGATGGACG CGCTGCGCTG TCCGGCCGAC GACGCCGATG TCAGCAAGCT CTCCGGCGGT GAGCGCCGCC GCGTCGCGCT GTGCCGGCTG CTGCTCGATC AGCCCGAGCT GCTGCTGCTC GACGAGCCGA CCAACCATCT TGACGCCGAA TCGGTGTCCT GGCTGGAAGG CCACCTGCGC AACTATCCCG GCGCGATCCT GATCGTCACC CACGACCGCT ACTTCCTCGA CAACGTCACC AGCTGGATCC TCGAGCTCGA TCGCGGCAAG GGCATTCCCT ACGAGGGCAA CTACTCGTCC TGGCTACAGC AGAAGCAGAA ACGGCTGGAG CAGGAGGGGC GCGAGGAGGC GGCGCATCAG CGCACCCTGG CCCGCGAGCA GGAGTGGATC GCGGCCTCGC CGAAGGCCCG CCAGGCCAAG TCCAAGGCGC GCTACCAGCG CTACGAAGAG CTGCTCAAGA AGGCCAGCGA GAAGCAGACC CAGACCGCGC AGATCATCAT TCCCGTGGCT GAGCGCCTCG GCAACAACGT CATCGATTTC GAAGGCCTGA CCAAGAGCTT CGGGGATCGC CTGCTGATCG ACAATCTCAC CTTCAAGCTG CCGCCGGGCG GCATCGTCGG TGTCATCGGC CCGAACGGTG CCGGCAAGAC CACGCTGTTC CGCATGATCA CCGGGCAGGA GAAGCCGGAC GCCGGCACCA TTACCGTCGG CGAGACCGTG CATCTCGGCT ATGTCGACCA GTCGCGCGAT GCGCTCGACG GCAACAAGAC GGTGTGGGAG GAGATCTCCG GCGGCAACGA GCTGATCCTG CTCGGCAAGA AGGAAGTGAA CTCGCGCGGC TATTGCTCGT CCTTCAACTT CAAGGGCGCC GACCAGCAGA AGAAGGTCGG CGCGCTCTCC GGCGGTGAGC GCAATCGCGT GCATCTCGCG AAGATGCTGA AGTCGGGCGC CAACGTCCTG CTGCTCGACG AGCCGACCAA CGATCTCGAT GTCGACACCT TGCGCGCGCT CGAAGAGGCG CTGGAGGATT TCGCCGGCTG CGCCGTCATC ATCAGCCACG ATCGCTGGTT CCTCGACCGT ATCGCGACCC ACATGCTGGC CTTCGAGGGC GACAGCCATG TCGAATGGTT CGAAGGCAAC TTCCAGGACT ATGAGAAGGA CAAGATGCGC CGACTCGGCC AGGACAGCGT CATCCCGCAC CGGGTCAAGT ACAAGAAGCT GACGCGCTGA
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Protein sequence | MARQFVYFMQ GLSKTYPTRK VLDNIHLSFY PDAKIGVLGV NGSGKSTLLK IMAGIDKEYT GEAWVAEGAR VGYLEQEPQL DPKLSVRENV MQGVAKQKAI LDRYNELAMN YSEETADEMT KLQDEIEAQG LWDLDSKVDQ AMDALRCPAD DADVSKLSGG ERRRVALCRL LLDQPELLLL DEPTNHLDAE SVSWLEGHLR NYPGAILIVT HDRYFLDNVT SWILELDRGK GIPYEGNYSS WLQQKQKRLE QEGREEAAHQ RTLAREQEWI AASPKARQAK SKARYQRYEE LLKKASEKQT QTAQIIIPVA ERLGNNVIDF EGLTKSFGDR LLIDNLTFKL PPGGIVGVIG PNGAGKTTLF RMITGQEKPD AGTITVGETV HLGYVDQSRD ALDGNKTVWE EISGGNELIL LGKKEVNSRG YCSSFNFKGA DQQKKVGALS GGERNRVHLA KMLKSGANVL LLDEPTNDLD VDTLRALEEA LEDFAGCAVI ISHDRWFLDR IATHMLAFEG DSHVEWFEGN FQDYEKDKMR RLGQDSVIPH RVKYKKLTR
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