| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6250 |
|---|
| Symbol | |
|---|
| ID | 5150637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6491293 |
|---|
| End bp | 6491874 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640560959 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001242076 |
|---|
| Protein GI | 148257491 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2862] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.295569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCT CCGACGCGCC CCTGTCCTCC AAGGGCGGAG CGCTGCGCCC CATTCCCATG
CTGATCTTCG GCTCGCGCTG GCTGCAGCTG CCGCTCTATG TCGGGCTGAT CATCGCGCAG
GGCGTCTATG TCGTGCTCTT CCTGAAGGAG CTCTGGCACC TGTTCGCCCA CGCCTTCGAC
TTCTCCGAGC AGCAGATCAT GCTGGCCGTG CTCGGTTTGA TCGACGTCGT CATGATCTCG
AACCTGCTCG TGATGGTGAT CGTCGGCGGC TACGAGACCT TCGTGTCACG GCTCAATCTG
CAGGGCCATC CCGACGAGCC GGAATGGCTC AGCCACGTCA ATGCCAGCGT GCTGAAGATC
AAGCTGGCGA TGGCGATCAT CGGCATCTCG TCGATCCATC TGCTGCGGAC GTTCATCGAG
GCGGGCGCGC TGTCATCGGG CAAGTCGACC TACACCGAGA CCGGCGTGAT GTGGCAGACC
ATCATCCATA CGGTGTTCAT CCTGTCCGCG ATCGGCATCG CCATGGTCGA CAAATTGTCG
AATGCCGCGA TCGAGGACGC GAAGCAGGCG GCGGGGCATT AG
|
|---|
| Protein sequence | MSSSDAPLSS KGGALRPIPM LIFGSRWLQL PLYVGLIIAQ GVYVVLFLKE LWHLFAHAFD
FSEQQIMLAV LGLIDVVMIS NLLVMVIVGG YETFVSRLNL QGHPDEPEWL SHVNASVLKI
KLAMAIIGIS SIHLLRTFIE AGALSSGKST YTETGVMWQT IIHTVFILSA IGIAMVDKLS
NAAIEDAKQA AGH
|
|---|
| |