| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6226 |
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| Symbol | thiC |
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| ID | 5149212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6472979 |
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| End bp | 6474880 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640560938 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001242055 |
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| Protein GI | 148257470 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.642096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC GCTCCAATCC CGACACGACA CTGCCCGCCG TGACCACCGG TCCGCTGCCC
TCCTCGCGCA AGATCTATGC GGCGCCGGAC TCCGCGCCCG ATTTGCGCGT GCCGCTGCGC
GAGATCATCC TCTCCGAGGC CGCCGGCGAG CCGAACCTGC CGGTGTACGA CACGTCGGGC
CCCTACACCG ATCCCTCCGT CACCATCGAC GTCAATGCCG GCCTGCCGCG CAACCGCACG
GCCTGGGTGC TCGAACGCGG TGGCGTCGAG GAGTATGAGG GGCGCGACAT CAAGCCGGAG
GACAACGGCA ATGTCGGCGC CGACAAGGCG GCGAAAGCCT TCATCGCGCA TCACAAGCCG
CTGCGCGGCC TCGACGGTCA CAAGATCACC CAGCTCGAAT TCGCCCGCGC CGGCATCATC
ACCAAGGAGA TGATCTACGT CGCCGAGCGC GAGAATCTTG GCCGCAAGCA GCAGCTGGAA
CGCGCCGAAG CCGCGCTCGC CGACGGCGAG AGTTTTGGCG CCGAGGTCCC CGCCTTCATC
ACGCCGGAGT TCGTGCGCTC CGAGATCGCG CGGGGACGGG CCATCATCCC CTGCAACATC
AACCACGCCG AATTGGAGCC GATGATCATC GGCCGCAACT TTCTCACCAA GATCAACGCC
AATATCGGCA ACTCGGCGGT GACCTCGTCC GTCGAGGAGG AAGTGGACAA GATGGTGTGG
GCGATCCGCT GGGGCGCCGA CACGGTGATG GACCTCTCGA CCGGCCGCAA CATCCACACC
ACCCGCGAAT GGATCCTGCG CAACTCGCCG GTGCCGATCG GCACGGTGCC GATCTACCAG
GCGCTGGAGA AGTGCAACGG CGATCCGGTC AAGCTGACCT GGGAGCTCTA CAAGGACACG
CTGATCGAGC AGTGCGAACA GGGCGTCGAC TACTTCACCA TCCATGCCGG CGTGCGGCTG
CAATACATCC ACCTCACCGC GTCACGCGTC ACCGGCATCG TCTCGCGCGG CGGCTCGATC
ATGGCCAAGT GGTGCCTCGC GCATCACAAG GAGAGCTTCC TCTACACGCA TTTCGACGAG
ATCTGCGACA TCATGCGCAA GTATGACGTC TCGTTCTCGC TCGGCGACGG CCTGCGCCCC
GGCTCGATCG CGGACGCTAA CGACCGCGCG CAGTTCGCGG AGCTGGAGAC GCTCGGCGAG
CTCACCAAGA TCGCCTGGGA CAAGGGCTGC CAGGTCATGA TCGAGGGCCC CGGCCACGTG
CCGATGCACA AGATCAAGAT CAACATGGAC AAGCAGCTCA AGGAGTGCGG CGAGGCGCCG
TTCTATACGC TCGGGCCGCT GACGACGGAC ATCGCACCCG GCTACGACCA CATCACGTCA
GGCATCGGCG CCGCCATGAT CGGCTGGTTC GGCTGCGCGA TGCTGTGCTA CGTGACGCCG
AAGGAGCATC TCGGTCTGCC CGATCGCAAC GACGTCAAGA CCGGCGTCAT CACCTACAAG
ATCGCCGCCC ACGCCGCCGA TCTCGCCAAG GGCCATCCCG CCGCGCAGCT GCGCGACGAT
GCGCTGTCCC GCGCCCGCTT CGAGTTCCGC TGGACCGACC AGTTCAACCT CGGTCTCGAC
CCGGACACGG CCAAGAGCTT CCACGACGAG ACCCTGCCCA AGGAAGCCCA CAAGGTCGCG
CATTTCTGCT CGATGTGCGG CCCGAAATTC TGCTCGATGA AGATCACCCA GGACGTCCGC
GACTACGCCG CCACGCTGAA CGATCCGACC ACCGTCGGCG TGACCATCAG CGGCACCATC
GAAGACGGCA TGGCCCAGAT GAGCGCCAAG TTCAAGGAAA TGGGCGGCAG CGTGTATCTC
GATGCTGACA AAGTGAAGGA GAGCAACAAG GCGTTGTCCT GA
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| Protein sequence | MNIRSNPDTT LPAVTTGPLP SSRKIYAAPD SAPDLRVPLR EIILSEAAGE PNLPVYDTSG
PYTDPSVTID VNAGLPRNRT AWVLERGGVE EYEGRDIKPE DNGNVGADKA AKAFIAHHKP
LRGLDGHKIT QLEFARAGII TKEMIYVAER ENLGRKQQLE RAEAALADGE SFGAEVPAFI
TPEFVRSEIA RGRAIIPCNI NHAELEPMII GRNFLTKINA NIGNSAVTSS VEEEVDKMVW
AIRWGADTVM DLSTGRNIHT TREWILRNSP VPIGTVPIYQ ALEKCNGDPV KLTWELYKDT
LIEQCEQGVD YFTIHAGVRL QYIHLTASRV TGIVSRGGSI MAKWCLAHHK ESFLYTHFDE
ICDIMRKYDV SFSLGDGLRP GSIADANDRA QFAELETLGE LTKIAWDKGC QVMIEGPGHV
PMHKIKINMD KQLKECGEAP FYTLGPLTTD IAPGYDHITS GIGAAMIGWF GCAMLCYVTP
KEHLGLPDRN DVKTGVITYK IAAHAADLAK GHPAAQLRDD ALSRARFEFR WTDQFNLGLD
PDTAKSFHDE TLPKEAHKVA HFCSMCGPKF CSMKITQDVR DYAATLNDPT TVGVTISGTI
EDGMAQMSAK FKEMGGSVYL DADKVKESNK ALS
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