Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6208 |
Symbol | |
ID | 5150084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6453408 |
End bp | 6454289 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640560919 |
Product | putative phosphatidylserine decarboxylase |
Protein accession | YP_001242037 |
Protein GI | 148257452 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000986716 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCA AAAGCCTGAT CGCCTCCTTC ACCCAACAGG AAGACCTCAA CTTCCTGCTC ACCAACCGCG TGCCGCGCGC CGCGCTGACC CGCTTCATGG GCTGGTTCTC CAAGATCGAG AATCCGCTGG TGAAGGACGC CTCCATCGCG CTGTGGAAGC TGTTCTCCGA TCTCGATCTC TCCGAGGCCA AGGAGAGCGA GTTCAAGAGC CTGCATGCCT GCTTCACCCG CGAGCTGAAG CCAGGCCTGC GGCCGTTCGA TCCCGATCCC GCGATCGTGA CCAGCCCGTC CGACGGCATC ATCGGCGCCC ATGGCCAGAT CCGCGACGGC GAGCTCTATC AGATCAAGGG CGCCCCTTAC GCCTTGCGCG ACCTCGTTGC GGATCCCGCC GTGGTCGAGA CCCATCGCAA TGGCTGCTTC GTCACCATCC GGCTGACCTC GAGCATGTAT CATCGCTTTC ACGCGCCAGC GGACATGACG CTCGAGCATG TCAGCCTGAT CCATGGCGAT GTCTGGAACG TCAATCCGAT CGCGCTGAAG CGCGTCGAGC GGCTGTTCTG CAAGAACGAG CGCGCCGTCA TCCGCACCCA TCTCGCGACA GGCGAGCCGT TCACCATCGT GCCGGTCGCT GCGATCCTGG TCGCCAGCAT CCGCCTGCAC GCGCTCGACC GCGTATTGAA CGCGCAGACC GAGCGGCCGC TCGCCTACAG CTGCAACAAT GTCGTGCGCA AGGGCGACGA ACTCGGCTGG TTCGAGCACG GCTCCACCAT CATCCTGCTC GCGCCCGGCG ACTTCACCTT CTGCCCTGAG ATCGCCGAGG GCGCGCGGAT TCGCGCCGGC CAACCGCTGT GGCGCAGGCG CGTCGCCGCC GAGGGAATGT AA
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Protein sequence | MTVKSLIASF TQQEDLNFLL TNRVPRAALT RFMGWFSKIE NPLVKDASIA LWKLFSDLDL SEAKESEFKS LHACFTRELK PGLRPFDPDP AIVTSPSDGI IGAHGQIRDG ELYQIKGAPY ALRDLVADPA VVETHRNGCF VTIRLTSSMY HRFHAPADMT LEHVSLIHGD VWNVNPIALK RVERLFCKNE RAVIRTHLAT GEPFTIVPVA AILVASIRLH ALDRVLNAQT ERPLAYSCNN VVRKGDELGW FEHGSTIILL APGDFTFCPE IAEGARIRAG QPLWRRRVAA EGM
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