| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6188 |
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| Symbol | |
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| ID | 5154666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6429754 |
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| End bp | 6431124 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640560900 |
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| Product | putative multidrug resistance protein A |
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| Protein accession | YP_001242018 |
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| Protein GI | 148257433 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.650101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.753316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTG CGAGAGAACA GGCGGTGCGG GCACGCCGTC CGGATGCTGA GGAAGCGCCG
GACCAGGGAC AGCCTGCCAC AGCCCGTCCC CAGGCCAGCG AGCCGGCGCA GCACAAGGCT
GCTGAAACGC GGACAAATGA CGTCAAGGCT GGCGAGGCCG GTACCAAGGA GGCTGATATC
AAGGCCGACT CCGTCGCCGA GGCGCCGCTC GAACGGCCGC CGGCCGCGCC GGCCGGGGCG
CCCGCCGGGC AGAAGCCGCC GGCCAGCACC GCAGCGCCGA AATCCGGCAA GCGCAAGCGC
GTGCTCACAG GCGTCGGCCT GCTGTTGGCG CTCGCCGCCG CCGGCTATGC CACGCATTAT
TTCATTGTCG GCCGCTTCAT GGTCTCGACC GATGATTCCT ATGTCCGCGC CAACAACACG
ATGCTTGGCG CCCGCGTGTC CGGTCATATC CAGGAGATCG TGCCGCGCGA CAATTCGGTG
GTCCGCAAGG GCGACGTGAT CTTCCGCATC GATGACGGCG ACTACAAGAT CGCGGTCGAC
GCAGCGCGCA GCAAGATCGC GACCCAGGAG GCGACGATCG CGCGCATCGG CCGGCAGGTC
GCCGCGCAGC AGAGCGCCGT CGAGCAGGCG CAGGCCAATC TGACCTCGTC CGAAGCCGCA
ATGAAGCGCG CCGGTCTCGA CTATGAGCGC CAGCAGGCGC TGAGCAGCAA GGGTTTTGCC
TCGCATGCGA CGTTCGAACA GTCGGAAGCC GCGCGCGACC AGGGCATGGC CGCAGTCCGC
GCCGCGCGCG CCGCGTTCGA CGCCGCGCGC GACAATGTCG AGGTGACCAA GGCGCAGCAG
GTCGAGGCCC AGGCGCAGCT TGCCGAGCTG AAGACGTCGC TGGCCAAGGC CGAGCGCGAC
CTCGAATTTG CCACCGTGCG TGCACCGGTC GACGGCACGT TTTCCAACCG CCTCGTCAAC
ACCGGCGACT TCGTCGCGGT GGGCCAGCGG CTCGGCAACG TGGTGCCGCT CGACGACGTC
TTCATCGATG CCAATTTCAA AGAAACCCAG CTCAAGCGGA TCCGTCCGGG CCAGCCGGTG
ACGATCAAGG TCGACGCCTA TGGCGCTCGC GGCTTCAAGG GCGTTGTCGA CAGCATCTCG
CCGGCCGCGG GCTCGGTGTT TACCCTGCTG CCGCCGGACA ACGCGACCGG CAACTTCACC
AAGATCGTGC AGCGGTTGCC GGTGCGCATC CGTGTGCCGA AGGAGGTGGC GCGGCAGAAC
CTGCTGCGCG CCGGCATGTC GGTCTACGTC ACCGTCGACA CGACCGACGG CGCCAAGGAT
GCCGACACCG ACGCCGACCT CGACGCGCCG GCGACGGTGC AGGGGAAGTA G
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| Protein sequence | MAAAREQAVR ARRPDAEEAP DQGQPATARP QASEPAQHKA AETRTNDVKA GEAGTKEADI
KADSVAEAPL ERPPAAPAGA PAGQKPPAST AAPKSGKRKR VLTGVGLLLA LAAAGYATHY
FIVGRFMVST DDSYVRANNT MLGARVSGHI QEIVPRDNSV VRKGDVIFRI DDGDYKIAVD
AARSKIATQE ATIARIGRQV AAQQSAVEQA QANLTSSEAA MKRAGLDYER QQALSSKGFA
SHATFEQSEA ARDQGMAAVR AARAAFDAAR DNVEVTKAQQ VEAQAQLAEL KTSLAKAERD
LEFATVRAPV DGTFSNRLVN TGDFVAVGQR LGNVVPLDDV FIDANFKETQ LKRIRPGQPV
TIKVDAYGAR GFKGVVDSIS PAAGSVFTLL PPDNATGNFT KIVQRLPVRI RVPKEVARQN
LLRAGMSVYV TVDTTDGAKD ADTDADLDAP ATVQGK
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