| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6187 |
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| Symbol | |
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| ID | 5154665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6427960 |
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| End bp | 6429549 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640560899 |
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| Product | putative multidrug resistance protein B |
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| Protein accession | YP_001242017 |
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| Protein GI | 148257432 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.315728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.784997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CAACGACAGC CGATCCCACC ATGAGCGCGC CGGCGGCTGC GTCGGACCGC
ATCGCGCCGC GGCGGCTGAT TGCGTTCCTG ATCATGGTGT TCGGCATGTT CATGTCGATC
CTGGACATCC AGATCGTGTC GGCCTCGCTC AGCGAGATCC AGGCCGGATT GTCGGCGAGC
TCGAGCGAAG TGTCCTGGGT CCAGACCGCT TATCTGATCG CCGAGGTGAT CGCGATTCCG
TTGTCGGGCT TCCTGTCGCG CGCGCTCGGC ACGCGGCTGT TGTTTGCGAT CTCGGCCGCC
GGCTTCACCA TCTCCAGCTT CCTGTGCGGC TTCGCCTCGT CGATCGAGCA GATGATCCTG
TGGCGCGCGA TCCAGGGCTT TCTCGGCGCC GGCATGATCC CGACCGTGTT CGCCTCGGCC
TACACGGTGT TTCCGCGCTC CAAGTTCCAC ATCGTCGGTC CGATCATCGG CCTGGTCGCG
ACGCTCGCGC CGACCATCGG CCCGACCGTC GGCGGCTACA TCACCGATGC GATGTCGTGG
CACTGGCTGT TCTTCATCAA TATCCCGCCG GGCGTCATGA TCACGATCGG CGTGCTGGCA
CTGGTCGATT TCGACGAGCC GCATTTCGAG CTGCTCGAAC GCTTCGACTG GTGGGGCCTG
CTGTTCATGG CCGGCTTCCT CGGTTCACTG GAATATGTGC TGGAGGAGGG GCCGCAACAT
GAATGGCTGC AGGAGACCTC GGTGGCGGTC TTCGCCGTGG TCTGTGCGGT GTCGGCGGTG
TGCTTCTTCT GGCGCGTGCT GACGGTGGAT GAGCCGATCG TCGATCTCGG CGCGTTCACC
GACCGCAATT TCGCGGTCGG CTGCCTGTTG CAGTTCTGCG TCGGCATCGG CCTCTACGGC
CTGACCTACA TCTATCCGCG CTATCTCGCC GAGGTGCGCG GCTACAGCGC GCTGATGATC
GGCGAGACCA TGTTCGTCTC CGGCGTCACC ATGTTCCTGA TGGCGCCAGT GGTCGGCCGT
CTGATGGTGA AGATCGACAT GCGGCTGATC ATCGCGTTCG GCCTGATCAT TTTCGCGATC
GGCTCCTATC AGATGACCGG GATCACCCGT GACTATGATT TCTGGGAGCT GTTTCTGCCG
CAGGTGCTGC GCGGCGTCGG CATGATGTGC GCGATGGTGC CGACCAACAA CATTGCACTT
GGTACGCTTG CGCCCGATCG CGTCAAAAAC GCTTCCGGCC TGTTCAACCT GATGCGCAAT
CTCGGCGGCG CCGTCGGCCT CGCCGTGATC AACCAGGTGC TGAACGACCG TACCGATCTG
CATATTTCCC GCCTGCATGA GCGGGTGAAC TGGGGCAATG CGACCGCCGT CGAGACGCTG
AACATGCTGC AGCAGAAGCT GCAGGGCATG GGCGACTCGG CGCTGATGGC CATGAAGCAG
CTGTCGCAGA TCGTGCATCG CCAGGCCGTG GTGATGGGCT ATGGCGACGC CTTCTTCATG
CTGACCTGCT TCTATATCGC GCTCAGCTTC ATGGTGCTGC TGCTCAACAA GCCGAGCTCG
CCGATGGCCG CAGGCGGCGA CGCGCACTGA
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| Protein sequence | MATATTADPT MSAPAAASDR IAPRRLIAFL IMVFGMFMSI LDIQIVSASL SEIQAGLSAS
SSEVSWVQTA YLIAEVIAIP LSGFLSRALG TRLLFAISAA GFTISSFLCG FASSIEQMIL
WRAIQGFLGA GMIPTVFASA YTVFPRSKFH IVGPIIGLVA TLAPTIGPTV GGYITDAMSW
HWLFFINIPP GVMITIGVLA LVDFDEPHFE LLERFDWWGL LFMAGFLGSL EYVLEEGPQH
EWLQETSVAV FAVVCAVSAV CFFWRVLTVD EPIVDLGAFT DRNFAVGCLL QFCVGIGLYG
LTYIYPRYLA EVRGYSALMI GETMFVSGVT MFLMAPVVGR LMVKIDMRLI IAFGLIIFAI
GSYQMTGITR DYDFWELFLP QVLRGVGMMC AMVPTNNIAL GTLAPDRVKN ASGLFNLMRN
LGGAVGLAVI NQVLNDRTDL HISRLHERVN WGNATAVETL NMLQQKLQGM GDSALMAMKQ
LSQIVHRQAV VMGYGDAFFM LTCFYIALSF MVLLLNKPSS PMAAGGDAH
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