| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6184 |
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| Symbol | |
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| ID | 5154340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6423570 |
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| End bp | 6424826 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640560895 |
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| Product | putative RNA polymerase sigma factor |
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| Protein accession | YP_001242014 |
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| Protein GI | 148257429 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.805414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.819785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCGA TGACGCCTGA GGCGATCGAC CAGGTGTTCC GCGACGAGGC CGGCCGCGCG
CTCGCGACCT TGATCAGGCT GGTCGGTGAC TTCGAACTGG CCGAGGACGC GTTGCAGGAT
GCGTTCGCGG CGGCGCTGCT CAATTGGCGA GGGGCAGGGG CCCCTGCCAA TCCGCGCGCG
TGGCTGGTCA ATGTGGCGCG CAACAAGGCG ATCGATCGGA TCCGGCGCCA GCGCAACTTT
CGCGCCAAGG AAGCCGAGAT CGTCCATGCA ATCGAGCGCG ACGCCGTCAG CGACGAGGCG
GCCGCCACGC CAAACGATCT CGACGACGAC ATGCTGCGGC TGATCTTCAC CTGTTGCCAT
CCGTCCTTCG CGCCGGAGGT GCAGGTGGCG CTCACGTTGC GCACGGTCTG CGGACTGACC
ACGGCCGAGG TCGCACGTGC CTTCCTCGCC AGCGAGGAAG CGATGGCGCA GCGCCTGCTG
CGTGCCAAAC AGAAGATCCG CCTCGCCGGC ATTCCCTACG AGGTGCCCGG ACGCCACGCC
CTGGAAGAGC GTCTGCGCGG CGTGCTGACC GTGATCTATC TGGTGTTCAC GGAAGGCTAC
CTGGCGACCT CCGGACCGGA ACTGATCCGC CATGATCTTG CGCGCGAGGC GATCCGGCTT
GGCCGGCTCG TTCTCGGCCT GATGCCGGAG GCGCCCGACA TCAAAGGCCT GCTGGCCTTG
ATGCTGCTCC ACGATGCGCG CCGTGCCGGA CGGACCGATG CGTCCGGAGA CATCGTCCTC
CTGGAGGAGC AGGATCGGTC GCTGTGGAAC AGCGAGCAGA TCGCCGAAGG TCTTGACCTT
GTCGAACAGG CGCTTGGTGT CAGGGGACGG CCGCAGCCTT ATACGGTCCA GGCCGCGATC
GCCGCGCTCC ACGCCCAGGC GCAGAGCTAT CACGACACGG ATTGGCGCCA GATCGTCGGC
CTCTATGAGG TCCTGCTGCG GATTGCGCCG TCGCCGGTGA TCGAACTCAA TCACGCGGCC
GCAGTCTCGA TGGTCGACGG CCCCGCGCGG GCACTCGCGC TGGTCGAGTC GCTCGCCGCT
CGGGGCGGCT TGCGGCAGTA CGACCTGTTG CCGGCCGTGC GCGCGGACCT GTTGCGGCGA
CTCGATCGGC GCGAGGAGGC CCGTTCAGCC TACCGCGCGG CGCGGGATTC GACGCAGCTG
GAGCCGCTCA AGCGGCTTTA TGCCCGCCGC CTTGTCGAAC TGGATGCGGG CGCCTGA
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| Protein sequence | MSAMTPEAID QVFRDEAGRA LATLIRLVGD FELAEDALQD AFAAALLNWR GAGAPANPRA
WLVNVARNKA IDRIRRQRNF RAKEAEIVHA IERDAVSDEA AATPNDLDDD MLRLIFTCCH
PSFAPEVQVA LTLRTVCGLT TAEVARAFLA SEEAMAQRLL RAKQKIRLAG IPYEVPGRHA
LEERLRGVLT VIYLVFTEGY LATSGPELIR HDLAREAIRL GRLVLGLMPE APDIKGLLAL
MLLHDARRAG RTDASGDIVL LEEQDRSLWN SEQIAEGLDL VEQALGVRGR PQPYTVQAAI
AALHAQAQSY HDTDWRQIVG LYEVLLRIAP SPVIELNHAA AVSMVDGPAR ALALVESLAA
RGGLRQYDLL PAVRADLLRR LDRREEARSA YRAARDSTQL EPLKRLYARR LVELDAGA
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