Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6176 |
Symbol | murD |
ID | 5151497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6413442 |
End bp | 6414842 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640560887 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001242006 |
Protein GI | 148257421 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.138978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCCG TTACCTCATT CGCCGGAAAG ACCGTCGCCG TGTTCGGCCT TGGCGGGTCC GGGCTCGCCA GTTGCCACGC CCTTCGCGCG GGCGGTGCGG ACGTCGTGGC CGGCGACGAT GGCGCCGAGC GGCTGGCCGA GGCTGCCAAA GCCGGCTTCG TCACCGCGGA TCTGCGCACC GTGTCGTGGT CGGATTTCGC GGCGCTGGTG CTGGCGCCCG GCGTGCCGCT GACTCATCCG GTGCCGCATT GGAGCGTGCT CAAGGCGCGC GAGGCCGGCA TCGAGGTGAT CGGCGACATC GAGCTGTTCT GCCGCGAGCG CAGGCGGCAC GCACCGGATG CGCCGTTCGT CGCCATCACC GGCACCAACG GAAAATCGAC GACGACGGCG CTGATCGCGC ATCTGATGCA GACCGCCGGC TACGACACCC AGCTGGGCGG CAATATCGGC ACCGCGATCC TGTCGCTGGA GCCGCCGCGG ATGGGCCGGG TTCACGTCAT CGAGATGTCG TCCTATCAGA TCGACCTGAC GCCGTCGCTC GATCCGACCG TGGGCATCCT GCTCAATGTC AGCGAGGATC ACATCGACCG CCACGGCACG ATCGAAAACT ACGCCGCGGT CAAGGAGCGC CTGGTTGCCG GCGTCAAGCC GGAGGGGACC GCGATCATCG GCGTGGACGA TGGCTTTTCG CGCGCGATCG CCGATCGGCT CGACCAGGCC GGCAAGCGCG TGGTGCGCGT TTCGGTGAAG AACCCGCTGG CTGACGGTCT CTATGTCGAG CACGAGACCA TCCTGCGCAG CGCAAGTGGC GCGCGCAGCG AGGTCGCGCG GCTCGGCGGC ATCGGCTCGC TGCGCGGCCA GCACAATGCG CAGAACGCCG CCTGCGCCGC CGCCGCTACC CTCGCGATCG GCGTGAAGCA GGATGTGCTG CAGCAGGGGC TGCGCAGCTT CCCGGGGCTG GTGCATCGCA TGGAGCAGGT CGGCCGCCGC GGCCATGTCC TGTTTGTCAA CGACTCCAAG GGCACCAACG CGGATGCGAC GGCGCATGCG CTGTCGTCTT TCGCCGACAT CTTCTGGATC GCCGGCGGCA AACCCAAGGC CGGTGGCATC ACCAGCCTCG AAGGTTTCTT TCCGCGCATC CGCAAGGCCT ATCTGATCGG CGAGGCCGCG GCGGAGTTCG CCGGAACGCT CGGCAACAAG GTTCCGCACG CGATGTCCGG CACGCTCGAG GTCGCGGTGG CGCAGGCCGC TGCCGATGCC GAAGCTTCCG GGCTGACGGA CGCCGTGGTC CTGCTGTCGC CGGCCTGCGC CTCGTTCGAC CAATTCCGCA ATTTCGAGAT CCGCGGCGCC CGCTTCCGCG ATCTGGTGCA GGCGCTGCCG GGTGTGGAGC GGGTGGTTTA G
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Protein sequence | MIPVTSFAGK TVAVFGLGGS GLASCHALRA GGADVVAGDD GAERLAEAAK AGFVTADLRT VSWSDFAALV LAPGVPLTHP VPHWSVLKAR EAGIEVIGDI ELFCRERRRH APDAPFVAIT GTNGKSTTTA LIAHLMQTAG YDTQLGGNIG TAILSLEPPR MGRVHVIEMS SYQIDLTPSL DPTVGILLNV SEDHIDRHGT IENYAAVKER LVAGVKPEGT AIIGVDDGFS RAIADRLDQA GKRVVRVSVK NPLADGLYVE HETILRSASG ARSEVARLGG IGSLRGQHNA QNAACAAAAT LAIGVKQDVL QQGLRSFPGL VHRMEQVGRR GHVLFVNDSK GTNADATAHA LSSFADIFWI AGGKPKAGGI TSLEGFFPRI RKAYLIGEAA AEFAGTLGNK VPHAMSGTLE VAVAQAAADA EASGLTDAVV LLSPACASFD QFRNFEIRGA RFRDLVQALP GVERVV
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