| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6169 |
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| Symbol | ddlB |
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| ID | 5152033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6405590 |
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| End bp | 6406579 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640560880 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001241999 |
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| Protein GI | 148257414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0498246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCACTA CGATTTTGTT CGGCGGCTCC AACAAGGAAC GGCTTGTCTC GGTCGCCAGT
GCGCAGGCTT TGCATGCGAC GCTGCCCGAT TCCGACCTCT GGTTCTGGGA GGCCGACGAC
GCGGTGCATC GGGTGAGCGG CAAGGCGCTG GTCGCGCATG CCAGGCCGTT CGAGGAGCCG
TTCACGGCCG ACGGCCCGCG GATCGGGACT CTCGCTGATG CGCTCGACCG TGCCAAGGCG
GAGGATCGCG TGCTTGTGCT CGCTTTGCAT GGCGGCCGGG CGGAGAATGG CGAGCTTCAA
GTGATGTGTG AGATGCGCGG CGTGCCGTTT ACGGGCTCGA GCTCGGCTGC CTCGCATCTC
GCCTTCGACA AGGTCGCCGC CAAGCGCTTT GCCGTGCTCG GCGGCGTCAC GGTGGCAGAA
GGCGTCTCGC TCGCCGATGC CGAGGCCGCA CTGGCGCAGC ATGGCCGGTT GATCGCCAAA
CCCGTCAAGG ACGGCTCCAG CTTCGGCCTG ATCTTTGTCA ACGCGAAGCA GGATCTCGTC
GCGGTCCGGG CTGCCGCAGC GACGGAGGAG TATCTGATCG AGCCTTTCGT CACCGGCACG
GAGGCGACCT GCGGCGTGCT CGAGCAGCCG GATGGATCGT TGATCGCATT GCCGCCGATC
GAGATCCTGC CGGCCGATGG CGCCTTCAAC TATTTCGCCA AATATCTCGC GACCGCCACC
AAGGAAATCT GCCCCGGCCG CTTCACGCCG GAGATCACGG CCGCGCTGCA GACCGAAGCC
ATCAAGGCAC ATCGCGCGCT GTCATGCGGC GGCTATTCGC GCAGCGATTT CATCGTCTCG
GCCAATGGCC CGGTCTATCT GGAGACCAAT ACGCTGCCGG GGCTGACCGC GGCCTCGCTG
TACCCGAAGG CGCTGGCCGC GCAGAACATC TCGTTCCGCG ACTTCCTGCA GCAGCAGATC
GACCTGGCGA AGCGCCGTGC GGCCCGGTAG
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| Protein sequence | MRTTILFGGS NKERLVSVAS AQALHATLPD SDLWFWEADD AVHRVSGKAL VAHARPFEEP
FTADGPRIGT LADALDRAKA EDRVLVLALH GGRAENGELQ VMCEMRGVPF TGSSSAASHL
AFDKVAAKRF AVLGGVTVAE GVSLADAEAA LAQHGRLIAK PVKDGSSFGL IFVNAKQDLV
AVRAAAATEE YLIEPFVTGT EATCGVLEQP DGSLIALPPI EILPADGAFN YFAKYLATAT
KEICPGRFTP EITAALQTEA IKAHRALSCG GYSRSDFIVS ANGPVYLETN TLPGLTAASL
YPKALAAQNI SFRDFLQQQI DLAKRRAAR
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