| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6164 |
|---|
| Symbol | |
|---|
| ID | 5155322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6398417 |
|---|
| End bp | 6399310 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640560875 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241994 |
|---|
| Protein GI | 148257409 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0345463 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATAC AGCGTCTCAC GCGCGAAGTC CGTCATCCCG CAATGTCCGC CGGCCACAGC
CTGCGTCTGG CGGCCTCGCT GGTCCTGCTC GCGCTGCCGC TGGCCGGGTG CGGCACCGGC
GGGCTGTGGG ACAAGTTCCT GGCCAAGGAC GATACGTTCG TCGATGAGCC CGCGGACAAG
CTCTACAATG AGGGCTTGTA CCTCATGAAC GAGAAGAAGG ATGTCAAAGG CGCGACCAAG
AAGTTCGAAG AGGTCGACCG GCAACATCCT TATTCCGACT GGGCGCGTAA ATCGCTGCTG
ATGTCCGCCT ACGCGTCCTA TCAGGCAGGC GACTATGACG GCTGTATCGG CGCGGCCACC
CGTTATGTCA CGCTGCATCC GGGCAGCCCG GACGCCGCCT ATGCGCAATA CCTGATCGCC
GCGTCGCATT ACGACCAGAT CCCGGATATC AGCCGCGACC AGGGCCGGAC CGAGAAGGCG
ATCGCCGCAC TCGAAGAGGT GGTGCGCAAA TATCCGAACT CCGAATACGC CACCAACGCC
AAGGCGAAGA TGGAGGGCGC CCGCGACCAG CTCGCCGGCA AGGAGATGGA CGTCGGCCGC
TACTACATGC AGAAGCGCGA CTACACGGCG GCCATCAACC GCTTCAAGGC CGTCGTGACG
CAGTATCAGA CGACCCGCCA CGTCGAAGAG GCGCTGTACC GGCTGACCGA GGCCTACATG
ACCATCGGGA TCGTCGGCGA GGCCCAGACC GCCGCAGCCG TGCTTGGCCA CAACTTCCCT
GACAGTAAGT GGTACAAGGA CGCCTATAAC CTCGTGAAGT CCGGCGGCGT GGAACCCGAG
GAGAACAAGG GCTCCTACAT CTCCCGGGCC TTCAAGAAAC TGGGTCTCGG CTGA
|
|---|
| Protein sequence | MSIQRLTREV RHPAMSAGHS LRLAASLVLL ALPLAGCGTG GLWDKFLAKD DTFVDEPADK
LYNEGLYLMN EKKDVKGATK KFEEVDRQHP YSDWARKSLL MSAYASYQAG DYDGCIGAAT
RYVTLHPGSP DAAYAQYLIA ASHYDQIPDI SRDQGRTEKA IAALEEVVRK YPNSEYATNA
KAKMEGARDQ LAGKEMDVGR YYMQKRDYTA AINRFKAVVT QYQTTRHVEE ALYRLTEAYM
TIGIVGEAQT AAAVLGHNFP DSKWYKDAYN LVKSGGVEPE ENKGSYISRA FKKLGLG
|
|---|
| |