Gene BBta_6163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6163 
SymbolrecN 
ID5155321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6396618 
End bp6398291 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content70% 
IMG OID640560874 
ProductDNA repair protein RecN (recombination protein N) 
Protein accessionYP_001241993 
Protein GI148257408 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0430688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGC GACTGTCGAT CCGTGACATC GTCCTGATCG AACGACTCGA TCTCGAGTTT 
TCCAATGGGC TTGCGGTGCT GACCGGCGAG ACCGGCGCCG GCAAGTCGAT CCTGCTTGAT
GCTTTTGCGT TGGCCCTTGG CGGTCGCGGC GATGCCAGTC TGGTTCGCCA CGGCGCCGAG
CAGGGCCAGG TGACGGCCGT GTTCGAGATC GGCAAGGAGC ATCCGGCCGC AAGGATCCTC
GCCGCCAACG GCCTGGATGC CAATGGTGAG ATGATCCTGC GCCGCGTCCA ATATGGCGAC
GGCCGCACCC GTGCCTTCAT CAACGATCAG TCGGTGAGCG TGCAGACGCT CAAGGCGATC
GGCGCCACGC TGGTCGAGAT CCACGGCCAG CATGATGAGC GTGCGCTGGT CGATGCCGCC
ACCCACCGCC GGCTCTTGGA TGCCTTTGCG GGCCTGGAGA AGGACGTCGC CGCGGTCGAG
GCGCTGTGGG TCGCGCGCCG GACCGCCGTC ACGGCACTGG ACCAGCATCG CGCGGGCATG
GAACGGGCGG CCCGTGAGGC CGACTATCTG CGGCATGCCG CCGACGAGCT GAAGAAGCTG
GCGCCGAAGG AGGGGGAGGA GACGCAGCTC GCCGCCCGCC GCACCGCGAT GATGCAGGGC
GAAAAGATCG CGGGCGATCT GCGTGATGCG CAGGATGCCG TGAGCGGCAA CCAGTCGCCG
ATTGCAGCGC TCGCCGCCGC CGTGCGGCGG CTGGAACGGC GCGCGGTCAG TTCGCCCGCG
CTGGTCGACC CGGCGGTGAA GGCGATGGAT GCCGCGATCA ACGCGCTGGA GGAAGCCGAC
CAGCATCTGA CCGCCGCGCT CGCGGCGACC GATTTCGATC CGCTGGAGCT CGAGCGCATC
GAGGAGCGGC TGTTTGCGCT GCGGGCGGCC GCGCGCAAAT ATTCGACGCC GGTCGACGGG
CTGGCGGCGC TGGCGGCCAA ATATGCCGCC GATGTCGTCC TGATCGATGC CGGCGCCGAG
CAGCTGAAGA AGCTGGAAGC CGCGGCCGCC GCGGCGGATG GGCGTTATGC TGCGGCGGCA
GCCAAGCTGT CGGCGGCCCG CAGCAAGGCG GCGGAGAAGC TGAACCGCGC CGTCCATGCC
GAGCTCGCGC CGCTCAAGCT GGAGCGGGCC AAGTTCATGA CTCAGGTCGA CAGCGACGCC
GACGCGCCGG GGCCGGAGGG CATCGACCGG GTCGAGTTCT GGGTGCAGAC CAACCCCGGC
ACGCGGCCGG GCCCGATGAT GAAGGTCGCC TCCGGTGGTG AGTTGTCGCG GTTCCTGCTG
GCGCTCAAGG TGGTGCTGTC GGACCGCGGC TCGGCCCCGA CGCTGGTGTT CGACGAGATC
GATACCGGCG TGGGCGGCGC GGTGGCGGAT GCCATCGGCG CCCGGCTGGC GCGGCTTGCC
CATGGGGTCC AGGTCATGGC CGTCACCCAT GCCCCGCAGG TGGCCGCGCG GGCCGATCAG
CATCTCCTGA TCTCCAAGGA TGCGCTGGAT CGCGGCAAGC GCGTCGTCAC CCGCGTCAAC
ACGCTCGCCA CCCTGCACCG CCGCGAGGAG ATCGCCCGCA TGCTGGCGGG CGCTGAGGTC
ACCGCGGAGG CCCGCGCCGC CGCGGACCGG CTGCTGGAGG CGGCGGCGGC CTAG
 
Protein sequence
MLARLSIRDI VLIERLDLEF SNGLAVLTGE TGAGKSILLD AFALALGGRG DASLVRHGAE 
QGQVTAVFEI GKEHPAARIL AANGLDANGE MILRRVQYGD GRTRAFINDQ SVSVQTLKAI
GATLVEIHGQ HDERALVDAA THRRLLDAFA GLEKDVAAVE ALWVARRTAV TALDQHRAGM
ERAAREADYL RHAADELKKL APKEGEETQL AARRTAMMQG EKIAGDLRDA QDAVSGNQSP
IAALAAAVRR LERRAVSSPA LVDPAVKAMD AAINALEEAD QHLTAALAAT DFDPLELERI
EERLFALRAA ARKYSTPVDG LAALAAKYAA DVVLIDAGAE QLKKLEAAAA AADGRYAAAA
AKLSAARSKA AEKLNRAVHA ELAPLKLERA KFMTQVDSDA DAPGPEGIDR VEFWVQTNPG
TRPGPMMKVA SGGELSRFLL ALKVVLSDRG SAPTLVFDEI DTGVGGAVAD AIGARLARLA
HGVQVMAVTH APQVAARADQ HLLISKDALD RGKRVVTRVN TLATLHRREE IARMLAGAEV
TAEARAAADR LLEAAAA