Gene BBta_6160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6160 
Symbol 
ID5155458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6390765 
End bp6392588 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content68% 
IMG OID640560871 
Productputative aminopeptidase P 
Protein accessionYP_001241990 
Protein GI148257405 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0482402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAG CTCACTTCCA GACATTCGAA GATCCCGAAG CCGGCGTCGC CTTGACGGCC 
CGCCTCGCGG CGCTGCGCGA GGAACTTGCC CGGCGCAAGC TCACCGGCTT CATCGTGCCG
CGCGCCGACC AGCAGCAGAA CGAATATGTG CCGCCCTCCG AGGAGCGGCT GGCTTGGCTC
ACCGGCTTCA CCGGCTCGGC GGGCCTCGCA ATCGTGCTGC CGCAGGCGGC CGGCTTGTTC
GTCGATGGCC GCTACACGCT GCAGGCCGGC AAGCAGGTCG ACGGCAAGGC CTGGACGGTG
GAATCACTCA TCGAGCCGCC GCCGGAGAGC TGGCTGACCC GTCATCTGCA GAGCGGTGAC
CGCGTGGGCT TCGATCCCTG GCTGCATACG ACCGCGGCGG CCGAGCGCTT CGCCGCGGCC
TGCGCCAAGG TCGGGGCCGA GCTGGTCGCC GTCGAAGGCA ATCCGATCGA CAGCGTCTGG
ACCGAGCGCC CGCTGCCGCC GCTCGGTCCC GTGTCCATCC ACGTCACGGA ATTAGCGGGC
GAAAGCGAGG CGGACAAGCT TGGTCGGATC CGCGAGGAGA TCGGCCGTCT CGGCGTCGAG
GCGCTGGTGC TGTCCGACTC CCACAACGTC GCCTGGACCT TCAACATTCG CGGCAGCGAC
GTCTCGCACA CGCCATTGCC GCTGTCCTAT GCGGTGGTGC CGAAGAGCGG GCGGCCGACC
ATCTTCATCG ATCACCGCAA GCTCTCGAAT GTCACGCGCG ATCACCTCGA GCGGAACGCC
GACGTGGCCG AGCCGGATGC GCTGACGGCC AGCCTGGGCC GCTTGGCCCA GTCGGGCGCG
GCCATCGCGC TCGATAGCGC CACCGCGGCC GACGCCCTGA CACGCTTGAT CCTGGACGCC
GGCGGCAAGC CGGTGCGCGG CGCCGATCCC GTCAGCCTGC TCAAGGCGGC CAAGAACCAG
GTCGAGATCG AAGGCACACG CCGCGCCCAT CGACGCGACG CGGTCGCCCT GGCGCGCTTC
CTCGCCTTCA TCGACCGCGA AGCCCCGAAG GGCACGCTGA CCGAGATCGA TGCGGTGGAG
GCCCTGGAGA GCTTCCGCCG CGACACCGCT GCGCTCAAGG ACGTGTCGTT CCCGACCATT
TCGGGCACCG GCCCCAATGG TGCGATCGTC CATTACCGTG TGACCCGGAA GAGCAACCGG
CGCATTGTGC CGGGCGATCT GCTGCTGATC GATTCCGGCG CGCAATATCA AGACGGCACC
ACCGATGTCA CGCGGACGAT CGCCGTGGGC ACGCCGACCG GGGAGATGCG CGACCGCTTC
ACCCGCGTGC TGCGCGGGCA TCTCGCCATC GCGCGCGCGA TCTTTCCCGA CGGCACCACA
GGCGCCCAGC TCGACACGCT GGCGCGGCAG TTCCTGTGGC AGGCCGGCAT CGATTTCGAG
CACGGCACCG GCCACGGCGT CGGCAGCTAT CTCTCGGTGC ATGAGGGGCC GGCGCGGATC
TCCAAGCTCG GCACCACGCC GCTGAAGCGT GGCATGATCC TGTCGAACGA ACCCGGCTAC
TACAAGACCG ACGCGTTCGG CATCCGCATC GAGAATCTCG AGCTCGTGGT GGAAAAGGAG
ATCGCAGGCG CCGAGAAGAC GATGAACGGC TTCGAGGCGC TCACGCTGGC GCCGATCGAC
CGCCGCCTGA TCGACGTGGC CATGCTGAGC GCCGAGGAGC GCGCATGGCT CGATGCCTAT
CATGCAAGGG TCAGGGAGAC CGTCCGTCCG GCGCTCGACG AAGCCGACCA GCACTGGCTC
GATCAAGCGA CCGCCCCACT CTAA
 
Protein sequence
MFEAHFQTFE DPEAGVALTA RLAALREELA RRKLTGFIVP RADQQQNEYV PPSEERLAWL 
TGFTGSAGLA IVLPQAAGLF VDGRYTLQAG KQVDGKAWTV ESLIEPPPES WLTRHLQSGD
RVGFDPWLHT TAAAERFAAA CAKVGAELVA VEGNPIDSVW TERPLPPLGP VSIHVTELAG
ESEADKLGRI REEIGRLGVE ALVLSDSHNV AWTFNIRGSD VSHTPLPLSY AVVPKSGRPT
IFIDHRKLSN VTRDHLERNA DVAEPDALTA SLGRLAQSGA AIALDSATAA DALTRLILDA
GGKPVRGADP VSLLKAAKNQ VEIEGTRRAH RRDAVALARF LAFIDREAPK GTLTEIDAVE
ALESFRRDTA ALKDVSFPTI SGTGPNGAIV HYRVTRKSNR RIVPGDLLLI DSGAQYQDGT
TDVTRTIAVG TPTGEMRDRF TRVLRGHLAI ARAIFPDGTT GAQLDTLARQ FLWQAGIDFE
HGTGHGVGSY LSVHEGPARI SKLGTTPLKR GMILSNEPGY YKTDAFGIRI ENLELVVEKE
IAGAEKTMNG FEALTLAPID RRLIDVAMLS AEERAWLDAY HARVRETVRP ALDEADQHWL
DQATAPL