Gene BBta_6157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6157 
Symbol 
ID5155456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6387073 
End bp6388674 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content68% 
IMG OID640560869 
Productputative phytoene dehydrogenase family protein 
Protein accessionYP_001241988 
Protein GI148257403 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.375282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.113405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CCGACGTGAT CATCATCGGC GCCGGCCATA ATGGCCTGAC CTGTGCCGCC 
TATCTCGCAA TGGCGGGCTT GCGCGTGCAT GTGGTCGAAC GCCGCAAGGT GGTCGGCGGC
GCGGCGGTGA CGGAGGAGTT TCATCCCGGC TTCCGCAACT CCGTCGCCTC CTACACCGTG
AGCCTGCTCA ATCCGCGCGT GATCTCCGAA CTCAGACTGC ACGAGCACGG GTTGCAGATC
GTCGAGCGTC GCGCGCAGAA CTTCCTGCCT GCGCCCGATG GACGCTTCCT GCTGACCGGA
GAAGGCCGCA CCCAGGCGTC CGTCGCGCGG CTCAGCCGGC GCGACGCCGA CGCGATCGGT
CCATTCTCGG CGCGGCTGGA AGCGATCGCC GACGTCCTGC GCAGCCTGGT GCTGCGGGCG
CCGCCGAATC TCGTGCCGCA GTTCGGGCTC GCCGCCATCC GCGAGGCCGT CAACGCCCTC
GGCACGGCCA ACACGTTGCG CGCGCTGTCG CTCGAGCAGC AGCGCGACCT GCTCGATCTG
TTCACGCGCT CCGCCGGCGA GATGCTCGAC GACATTTTCG AGACAGATCT CGTGAAGGCC
TTGTTCGGCT TCGACGCCAT CGTTGGCAAT TATGCCAGCC CCTACGCGGC CGGTTCAGCC
TATGTGATGC TGCATCACGC GTTCGGCGAG GTGAACGGCA AGAAGGGCGT GTGGGGTCAC
GCCATCGGCG GCATGGGCGC GATCACGCAG GCCATGTCCC GTGCCCTGAA GGAGCTGGGT
ACGCTGATCG AGGTCAACGC GCCCGTGCGC GAGGTGATCG TCGAGCGGGG CCGGGCCAGC
GGCGTCACGC TGGAGGATGG CCGCACGATC CGCGCCCGCT ATGTCGCCGC CAACGTCAAT
CCGAAGCTGC TCTACACCCG GCTGGTCCCG GCGGACGCCC TGCCTGAGCC GTTCCTGGGC
CGGATCCGGA ACTGGCGCAA CGGCTCCGGG ACGTTCCGCA TGAATGTGGC GCTCAGCCGC
CTGCCCTCTT TCAGCGCGCT GCCTGGCGAA GGTGACCATC TGTCGGCCGG CATCATCCTG
GCGCCGAGCC TGGGCTATAT GGAGCAGGCC TATCTCGATG CGAAAATGGC CGGCTGGAGC
CGCGATCCGG TCGTCGAGTT GCTGATCCCG TCGACGCTCG ATGCGACGCT TGCCCCGCCC
GGTCAGCACG TCGCCAGCCT GTTCTGCCAG CATGTCGCGC CGGAACTGCC GGATGGCCGC
TCCTGGGACG ACCACCGCGA CGAGGTGGCC GATCTCATGA TCGCGACCGT CGACCGCTAC
GCCCCCGGTT TCGCCGCCAG TGTGATCGGA CGCCAGGTGC TGTCCCCGCT CGACCTCGAA
CGACAGTTCG GGCTGCTGGG CGGCGACATC TTCCATGGCG CGCTGACCCT CAACCAGTTG
TTCTCGGCCC GGCCGATGCT GGGTCACGCC GACTACCGCT CACCGCTCAA GGGTCTCTAT
CATTGCGGGG CCGGCAGCCA TCCTGGCGGC GGCGTCACCG GCGCCCCTGG CCGCAATGCG
GCGCAGGCCA TTCTGGCCGA CCATCGAGCG CTGTTCGGCT GA
 
Protein sequence
MNETDVIIIG AGHNGLTCAA YLAMAGLRVH VVERRKVVGG AAVTEEFHPG FRNSVASYTV 
SLLNPRVISE LRLHEHGLQI VERRAQNFLP APDGRFLLTG EGRTQASVAR LSRRDADAIG
PFSARLEAIA DVLRSLVLRA PPNLVPQFGL AAIREAVNAL GTANTLRALS LEQQRDLLDL
FTRSAGEMLD DIFETDLVKA LFGFDAIVGN YASPYAAGSA YVMLHHAFGE VNGKKGVWGH
AIGGMGAITQ AMSRALKELG TLIEVNAPVR EVIVERGRAS GVTLEDGRTI RARYVAANVN
PKLLYTRLVP ADALPEPFLG RIRNWRNGSG TFRMNVALSR LPSFSALPGE GDHLSAGIIL
APSLGYMEQA YLDAKMAGWS RDPVVELLIP STLDATLAPP GQHVASLFCQ HVAPELPDGR
SWDDHRDEVA DLMIATVDRY APGFAASVIG RQVLSPLDLE RQFGLLGGDI FHGALTLNQL
FSARPMLGHA DYRSPLKGLY HCGAGSHPGG GVTGAPGRNA AQAILADHRA LFG