Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6157 |
Symbol | |
ID | 5155456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6387073 |
End bp | 6388674 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640560869 |
Product | putative phytoene dehydrogenase family protein |
Protein accession | YP_001241988 |
Protein GI | 148257403 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.375282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.113405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAAA CCGACGTGAT CATCATCGGC GCCGGCCATA ATGGCCTGAC CTGTGCCGCC TATCTCGCAA TGGCGGGCTT GCGCGTGCAT GTGGTCGAAC GCCGCAAGGT GGTCGGCGGC GCGGCGGTGA CGGAGGAGTT TCATCCCGGC TTCCGCAACT CCGTCGCCTC CTACACCGTG AGCCTGCTCA ATCCGCGCGT GATCTCCGAA CTCAGACTGC ACGAGCACGG GTTGCAGATC GTCGAGCGTC GCGCGCAGAA CTTCCTGCCT GCGCCCGATG GACGCTTCCT GCTGACCGGA GAAGGCCGCA CCCAGGCGTC CGTCGCGCGG CTCAGCCGGC GCGACGCCGA CGCGATCGGT CCATTCTCGG CGCGGCTGGA AGCGATCGCC GACGTCCTGC GCAGCCTGGT GCTGCGGGCG CCGCCGAATC TCGTGCCGCA GTTCGGGCTC GCCGCCATCC GCGAGGCCGT CAACGCCCTC GGCACGGCCA ACACGTTGCG CGCGCTGTCG CTCGAGCAGC AGCGCGACCT GCTCGATCTG TTCACGCGCT CCGCCGGCGA GATGCTCGAC GACATTTTCG AGACAGATCT CGTGAAGGCC TTGTTCGGCT TCGACGCCAT CGTTGGCAAT TATGCCAGCC CCTACGCGGC CGGTTCAGCC TATGTGATGC TGCATCACGC GTTCGGCGAG GTGAACGGCA AGAAGGGCGT GTGGGGTCAC GCCATCGGCG GCATGGGCGC GATCACGCAG GCCATGTCCC GTGCCCTGAA GGAGCTGGGT ACGCTGATCG AGGTCAACGC GCCCGTGCGC GAGGTGATCG TCGAGCGGGG CCGGGCCAGC GGCGTCACGC TGGAGGATGG CCGCACGATC CGCGCCCGCT ATGTCGCCGC CAACGTCAAT CCGAAGCTGC TCTACACCCG GCTGGTCCCG GCGGACGCCC TGCCTGAGCC GTTCCTGGGC CGGATCCGGA ACTGGCGCAA CGGCTCCGGG ACGTTCCGCA TGAATGTGGC GCTCAGCCGC CTGCCCTCTT TCAGCGCGCT GCCTGGCGAA GGTGACCATC TGTCGGCCGG CATCATCCTG GCGCCGAGCC TGGGCTATAT GGAGCAGGCC TATCTCGATG CGAAAATGGC CGGCTGGAGC CGCGATCCGG TCGTCGAGTT GCTGATCCCG TCGACGCTCG ATGCGACGCT TGCCCCGCCC GGTCAGCACG TCGCCAGCCT GTTCTGCCAG CATGTCGCGC CGGAACTGCC GGATGGCCGC TCCTGGGACG ACCACCGCGA CGAGGTGGCC GATCTCATGA TCGCGACCGT CGACCGCTAC GCCCCCGGTT TCGCCGCCAG TGTGATCGGA CGCCAGGTGC TGTCCCCGCT CGACCTCGAA CGACAGTTCG GGCTGCTGGG CGGCGACATC TTCCATGGCG CGCTGACCCT CAACCAGTTG TTCTCGGCCC GGCCGATGCT GGGTCACGCC GACTACCGCT CACCGCTCAA GGGTCTCTAT CATTGCGGGG CCGGCAGCCA TCCTGGCGGC GGCGTCACCG GCGCCCCTGG CCGCAATGCG GCGCAGGCCA TTCTGGCCGA CCATCGAGCG CTGTTCGGCT GA
|
Protein sequence | MNETDVIIIG AGHNGLTCAA YLAMAGLRVH VVERRKVVGG AAVTEEFHPG FRNSVASYTV SLLNPRVISE LRLHEHGLQI VERRAQNFLP APDGRFLLTG EGRTQASVAR LSRRDADAIG PFSARLEAIA DVLRSLVLRA PPNLVPQFGL AAIREAVNAL GTANTLRALS LEQQRDLLDL FTRSAGEMLD DIFETDLVKA LFGFDAIVGN YASPYAAGSA YVMLHHAFGE VNGKKGVWGH AIGGMGAITQ AMSRALKELG TLIEVNAPVR EVIVERGRAS GVTLEDGRTI RARYVAANVN PKLLYTRLVP ADALPEPFLG RIRNWRNGSG TFRMNVALSR LPSFSALPGE GDHLSAGIIL APSLGYMEQA YLDAKMAGWS RDPVVELLIP STLDATLAPP GQHVASLFCQ HVAPELPDGR SWDDHRDEVA DLMIATVDRY APGFAASVIG RQVLSPLDLE RQFGLLGGDI FHGALTLNQL FSARPMLGHA DYRSPLKGLY HCGAGSHPGG GVTGAPGRNA AQAILADHRA LFG
|
| |